nwb-linkml/nwb_linkml/tests/test_io/test_io_nwb.py

"""
Placeholder test module to test reading from pynwb-generated NWB file
"""

from nwb_linkml.io.hdf5 import HDF5IO


def test_read_from_nwbfile(nwb_file):
    """
    Read data from a pynwb HDF5 NWB file

    Placeholder that just ensures that reads work and all pydantic models validate,
    testing of correctness of read will happen elsewhere.
    """
    res = HDF5IO(nwb_file).read()


def test_read_from_yaml(nwb_file):
    """
    Read data from a yaml-fied NWB file
    """
    pass
testing nwb file, and experimenting with yaml format 2024-08-30 07:39:10 +00:00			`"""`
			`Placeholder test module to test reading from pynwb-generated NWB file`
			`"""`

checkpointing working on model loading. it's a sloggggggggg 2024-09-03 07:54:56 +00:00			`from nwb_linkml.io.hdf5 import HDF5IO`

testing nwb file, and experimenting with yaml format 2024-08-30 07:39:10 +00:00
			`def test_read_from_nwbfile(nwb_file):`
			`"""`
			`Read data from a pynwb HDF5 NWB file`
Updating model generation methods to make both loader tests and hdmf include unit tests pass (pending following model update commit) 2024-09-11 22:44:57 +00:00
			`Placeholder that just ensures that reads work and all pydantic models validate,`
			`testing of correctness of read will happen elsewhere.`
testing nwb file, and experimenting with yaml format 2024-08-30 07:39:10 +00:00			`"""`
checkpointing working on model loading. it's a sloggggggggg 2024-09-03 07:54:56 +00:00			`res = HDF5IO(nwb_file).read()`
testing nwb file, and experimenting with yaml format 2024-08-30 07:39:10 +00:00

			`def test_read_from_yaml(nwb_file):`
			`"""`
			`Read data from a yaml-fied NWB file`
			`"""`
			`pass`