nwb-linkml/nwb_linkml/schema/core.nwb.retinotopy.include.yaml

name: core.nwb.retinotopy.include
id: core.nwb.retinotopy.include
imports:
- core.nwb.base
- nwb.language
- core.nwb.retinotopy.include
- core.nwb.retinotopy
prefixes:
  core.nwb.retinotopy:
    prefix_prefix: core.nwb.retinotopy
    prefix_reference: https://example.com/core.nwb.retinotopy/
default_prefix: core.nwb.retinotopy
classes:
  ImagingRetinotopy__axis_1_phase_map:
    name: ImagingRetinotopy__axis_1_phase_map
    description: Phase response to stimulus on the first measured axis.
    attributes:
      name:
        name: name
        ifabsent: string(axis_1_phase_map)
        range: string
        required: true
        equals_string: axis_1_phase_map
      dimension:
        name: dimension
        description: 'Number of rows and columns in the image. NOTE: row, column representation
          is equivalent to height, width.'
        range: int32
      field_of_view:
        name: field_of_view
        description: Size of viewing area, in meters.
        range: float32
      unit:
        name: unit
        description: Unit that axis data is stored in (e.g., degrees).
        range: text
      array:
        name: array
        range: ImagingRetinotopy__axis_1_phase_map__Array
  ImagingRetinotopy__axis_1_phase_map__Array:
    name: ImagingRetinotopy__axis_1_phase_map__Array
    is_a: Arraylike
    attributes:
      num_rows:
        name: num_rows
        range: float32
        required: true
      num_cols:
        name: num_cols
        range: float32
        required: true
  ImagingRetinotopy__axis_1_power_map:
    name: ImagingRetinotopy__axis_1_power_map
    description: Power response on the first measured axis. Response is scaled so
      0.0 is no power in the response and 1.0 is maximum relative power.
    attributes:
      name:
        name: name
        ifabsent: string(axis_1_power_map)
        range: string
        required: true
        equals_string: axis_1_power_map
      dimension:
        name: dimension
        description: 'Number of rows and columns in the image. NOTE: row, column representation
          is equivalent to height, width.'
        range: int32
      field_of_view:
        name: field_of_view
        description: Size of viewing area, in meters.
        range: float32
      unit:
        name: unit
        description: Unit that axis data is stored in (e.g., degrees).
        range: text
      array:
        name: array
        range: ImagingRetinotopy__axis_1_power_map__Array
  ImagingRetinotopy__axis_1_power_map__Array:
    name: ImagingRetinotopy__axis_1_power_map__Array
    is_a: Arraylike
    attributes:
      num_rows:
        name: num_rows
        range: float32
        required: true
      num_cols:
        name: num_cols
        range: float32
        required: true
  ImagingRetinotopy__axis_2_phase_map:
    name: ImagingRetinotopy__axis_2_phase_map
    description: Phase response to stimulus on the second measured axis.
    attributes:
      name:
        name: name
        ifabsent: string(axis_2_phase_map)
        range: string
        required: true
        equals_string: axis_2_phase_map
      dimension:
        name: dimension
        description: 'Number of rows and columns in the image. NOTE: row, column representation
          is equivalent to height, width.'
        range: int32
      field_of_view:
        name: field_of_view
        description: Size of viewing area, in meters.
        range: float32
      unit:
        name: unit
        description: Unit that axis data is stored in (e.g., degrees).
        range: text
      array:
        name: array
        range: ImagingRetinotopy__axis_2_phase_map__Array
  ImagingRetinotopy__axis_2_phase_map__Array:
    name: ImagingRetinotopy__axis_2_phase_map__Array
    is_a: Arraylike
    attributes:
      num_rows:
        name: num_rows
        range: float32
        required: true
      num_cols:
        name: num_cols
        range: float32
        required: true
  ImagingRetinotopy__axis_2_power_map:
    name: ImagingRetinotopy__axis_2_power_map
    description: Power response on the second measured axis. Response is scaled so
      0.0 is no power in the response and 1.0 is maximum relative power.
    attributes:
      name:
        name: name
        ifabsent: string(axis_2_power_map)
        range: string
        required: true
        equals_string: axis_2_power_map
      dimension:
        name: dimension
        description: 'Number of rows and columns in the image. NOTE: row, column representation
          is equivalent to height, width.'
        range: int32
      field_of_view:
        name: field_of_view
        description: Size of viewing area, in meters.
        range: float32
      unit:
        name: unit
        description: Unit that axis data is stored in (e.g., degrees).
        range: text
      array:
        name: array
        range: ImagingRetinotopy__axis_2_power_map__Array
  ImagingRetinotopy__axis_2_power_map__Array:
    name: ImagingRetinotopy__axis_2_power_map__Array
    is_a: Arraylike
    attributes:
      num_rows:
        name: num_rows
        range: float32
        required: true
      num_cols:
        name: num_cols
        range: float32
        required: true
  ImagingRetinotopy__focal_depth_image:
    name: ImagingRetinotopy__focal_depth_image
    description: 'Gray-scale image taken with same settings/parameters (e.g., focal
      depth, wavelength) as data collection. Array format: [rows][columns].'
    attributes:
      name:
        name: name
        ifabsent: string(focal_depth_image)
        range: string
        required: true
        equals_string: focal_depth_image
      bits_per_pixel:
        name: bits_per_pixel
        description: Number of bits used to represent each value. This is necessary
          to determine maximum (white) pixel value.
        range: int32
      dimension:
        name: dimension
        description: 'Number of rows and columns in the image. NOTE: row, column representation
          is equivalent to height, width.'
        range: int32
      field_of_view:
        name: field_of_view
        description: Size of viewing area, in meters.
        range: float32
      focal_depth:
        name: focal_depth
        description: Focal depth offset, in meters.
        range: float32
      format:
        name: format
        description: Format of image. Right now only 'raw' is supported.
        range: text
      array:
        name: array
        range: ImagingRetinotopy__focal_depth_image__Array
  ImagingRetinotopy__focal_depth_image__Array:
    name: ImagingRetinotopy__focal_depth_image__Array
    is_a: Arraylike
    attributes:
      num_rows:
        name: num_rows
        range: uint16
        required: true
      num_cols:
        name: num_cols
        range: uint16
        required: true
  ImagingRetinotopy__sign_map:
    name: ImagingRetinotopy__sign_map
    description: Sine of the angle between the direction of the gradient in axis_1
      and axis_2.
    attributes:
      name:
        name: name
        ifabsent: string(sign_map)
        range: string
        required: true
        equals_string: sign_map
      dimension:
        name: dimension
        description: 'Number of rows and columns in the image. NOTE: row, column representation
          is equivalent to height, width.'
        range: int32
      field_of_view:
        name: field_of_view
        description: Size of viewing area, in meters.
        range: float32
      array:
        name: array
        range: ImagingRetinotopy__sign_map__Array
  ImagingRetinotopy__sign_map__Array:
    name: ImagingRetinotopy__sign_map__Array
    is_a: Arraylike
    attributes:
      num_rows:
        name: num_rows
        range: float32
        required: true
      num_cols:
        name: num_cols
        range: float32
        required: true
  ImagingRetinotopy__vasculature_image:
    name: ImagingRetinotopy__vasculature_image
    description: 'Gray-scale anatomical image of cortical surface. Array structure:
      [rows][columns]'
    attributes:
      name:
        name: name
        ifabsent: string(vasculature_image)
        range: string
        required: true
        equals_string: vasculature_image
      bits_per_pixel:
        name: bits_per_pixel
        description: Number of bits used to represent each value. This is necessary
          to determine maximum (white) pixel value
        range: int32
      dimension:
        name: dimension
        description: 'Number of rows and columns in the image. NOTE: row, column representation
          is equivalent to height, width.'
        range: int32
      field_of_view:
        name: field_of_view
        description: Size of viewing area, in meters.
        range: float32
      format:
        name: format
        description: Format of image. Right now only 'raw' is supported.
        range: text
      array:
        name: array
        range: ImagingRetinotopy__vasculature_image__Array
  ImagingRetinotopy__vasculature_image__Array:
    name: ImagingRetinotopy__vasculature_image__Array
    is_a: Arraylike
    attributes:
      num_rows:
        name: num_rows
        range: uint16
        required: true
      num_cols:
        name: num_cols
        range: uint16
        required: true