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https://github.com/p2p-ld/nwb-linkml.git
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36 lines
898 B
Python
36 lines
898 B
Python
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"""
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Adapters to linkML classes
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"""
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from nwb_schema_language import Dataset, Group
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from nwb_linkml.adapters.adapter import Adapter
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from linkml_runtime.linkml_model import ClassDefinition, SlotDefinition
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class ClassAdapter(Adapter):
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"""
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Adapter to class-like things in linkml, including datasets and groups
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"""
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cls: Dataset | Group
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def build(self) -> ClassDefinition:
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if self.cls.neurodata_type_def:
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name = self.cls.neurodata_type_def
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else:
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name = self.cls.name
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attrs = [
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SlotDefinition(
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name=attr.name,
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description=attr.doc,
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) for attr in self.cls.attributes
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]
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cls = ClassDefinition(
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name = name,
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is_a = self.cls.neurodata_type_inc,
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description=self.cls.doc,
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attributes=attrs
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)
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return cls
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