nwb-linkml/nwb_linkml/tests/test_io/test_io_hdf5.py

import pytest
from pathlib import Path

from nwb_linkml.io.hdf5 import HDF5IO

def test_hdf_read():
    NWBFILE = Path('/Users/jonny/Dropbox/lab/p2p_ld/data/nwb/sub-738651046_ses-760693773.nwb')
    if not NWBFILE.exists():
        return
    io = HDF5IO(path=NWBFILE)
    model = io.read('/general')
i'm just sorta making a mess here. coming back tomorrow 2023-09-06 07:50:49 +00:00			`import pytest`
			`from pathlib import Path`

			`from nwb_linkml.io.hdf5 import HDF5IO`

			`def test_hdf_read():`
			`NWBFILE = Path('/Users/jonny/Dropbox/lab/p2p_ld/data/nwb/sub-738651046_ses-760693773.nwb')`
perf enhancements to pydantic generation 2023-09-07 05:48:47 +00:00			`if not NWBFILE.exists():`
			`return`
i'm just sorta making a mess here. coming back tomorrow 2023-09-06 07:50:49 +00:00			`io = HDF5IO(path=NWBFILE)`
			`model = io.read('/general')`