mirror of
https://github.com/p2p-ld/nwb-linkml.git
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705 lines
28 KiB
YAML
705 lines
28 KiB
YAML
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name: core.nwb.icephys
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id: core.nwb.icephys
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imports:
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- core.nwb.base
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- hdmf-common.table
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- nwb.language
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default_prefix: core.nwb.icephys/
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classes:
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PatchClampSeries:
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name: PatchClampSeries
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description: An abstract base class for patch-clamp data - stimulus or response,
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current or voltage.
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is_a: TimeSeries
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attributes:
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stimulus_description:
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name: stimulus_description
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description: Protocol/stimulus name for this patch-clamp dataset.
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range: text
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sweep_number:
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name: sweep_number
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description: Sweep number, allows to group different PatchClampSeries together.
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range: uint32
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data:
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name: data
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description: Recorded voltage or current.
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multivalued: false
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range: PatchClampSeries_data
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required: true
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gain:
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name: gain
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description: Gain of the recording, in units Volt/Amp (v-clamp) or Volt/Volt
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(c-clamp).
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multivalued: false
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range: PatchClampSeries_gain
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required: false
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PatchClampSeries_data:
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name: PatchClampSeries_data
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description: Recorded voltage or current.
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attributes:
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unit:
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name: unit
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description: Base unit of measurement for working with the data. Actual stored
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values are not necessarily stored in these units. To access the data in
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these units, multiply 'data' by 'conversion' and add 'offset'.
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range: text
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array:
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name: array
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range: PatchClampSeries_data_Array
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PatchClampSeries_data_Array:
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name: PatchClampSeries_data_Array
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is_a: Arraylike
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attributes:
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num_times:
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name: num_times
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range: numeric
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required: true
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PatchClampSeries_gain:
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name: PatchClampSeries_gain
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description: Gain of the recording, in units Volt/Amp (v-clamp) or Volt/Volt (c-clamp).
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CurrentClampSeries:
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name: CurrentClampSeries
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description: Voltage data from an intracellular current-clamp recording. A corresponding
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CurrentClampStimulusSeries (stored separately as a stimulus) is used to store
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the current injected.
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is_a: PatchClampSeries
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attributes:
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data:
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name: data
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description: Recorded voltage.
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multivalued: false
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range: CurrentClampSeries_data
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required: true
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bias_current:
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name: bias_current
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description: Bias current, in amps.
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multivalued: false
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range: CurrentClampSeries_bias_current
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required: false
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bridge_balance:
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name: bridge_balance
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description: Bridge balance, in ohms.
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multivalued: false
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range: CurrentClampSeries_bridge_balance
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required: false
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capacitance_compensation:
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name: capacitance_compensation
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description: Capacitance compensation, in farads.
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multivalued: false
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range: CurrentClampSeries_capacitance_compensation
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required: false
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CurrentClampSeries_data:
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name: CurrentClampSeries_data
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description: Recorded voltage.
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attributes:
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unit:
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name: unit
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description: Base unit of measurement for working with the data. which is
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fixed to 'volts'. Actual stored values are not necessarily stored in these
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units. To access the data in these units, multiply 'data' by 'conversion'
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and add 'offset'.
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range: text
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CurrentClampSeries_bias_current:
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name: CurrentClampSeries_bias_current
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description: Bias current, in amps.
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CurrentClampSeries_bridge_balance:
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name: CurrentClampSeries_bridge_balance
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description: Bridge balance, in ohms.
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CurrentClampSeries_capacitance_compensation:
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name: CurrentClampSeries_capacitance_compensation
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description: Capacitance compensation, in farads.
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IZeroClampSeries:
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name: IZeroClampSeries
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description: Voltage data from an intracellular recording when all current and
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amplifier settings are off (i.e., CurrentClampSeries fields will be zero). There
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is no CurrentClampStimulusSeries associated with an IZero series because the
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amplifier is disconnected and no stimulus can reach the cell.
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is_a: CurrentClampSeries
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attributes:
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stimulus_description:
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name: stimulus_description
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description: An IZeroClampSeries has no stimulus, so this attribute is automatically
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set to "N/A"
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range: text
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bias_current:
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name: bias_current
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description: Bias current, in amps, fixed to 0.0.
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multivalued: false
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range: IZeroClampSeries_bias_current
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required: true
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bridge_balance:
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name: bridge_balance
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description: Bridge balance, in ohms, fixed to 0.0.
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multivalued: false
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range: IZeroClampSeries_bridge_balance
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required: true
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capacitance_compensation:
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name: capacitance_compensation
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description: Capacitance compensation, in farads, fixed to 0.0.
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multivalued: false
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range: IZeroClampSeries_capacitance_compensation
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required: true
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IZeroClampSeries_bias_current:
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name: IZeroClampSeries_bias_current
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description: Bias current, in amps, fixed to 0.0.
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IZeroClampSeries_bridge_balance:
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name: IZeroClampSeries_bridge_balance
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description: Bridge balance, in ohms, fixed to 0.0.
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IZeroClampSeries_capacitance_compensation:
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name: IZeroClampSeries_capacitance_compensation
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description: Capacitance compensation, in farads, fixed to 0.0.
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CurrentClampStimulusSeries:
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name: CurrentClampStimulusSeries
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description: Stimulus current applied during current clamp recording.
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is_a: PatchClampSeries
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attributes:
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data:
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name: data
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description: Stimulus current applied.
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multivalued: false
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range: CurrentClampStimulusSeries_data
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required: true
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CurrentClampStimulusSeries_data:
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name: CurrentClampStimulusSeries_data
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description: Stimulus current applied.
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attributes:
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unit:
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name: unit
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description: Base unit of measurement for working with the data. which is
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fixed to 'amperes'. Actual stored values are not necessarily stored in these
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units. To access the data in these units, multiply 'data' by 'conversion'
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and add 'offset'.
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range: text
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VoltageClampSeries:
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name: VoltageClampSeries
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description: Current data from an intracellular voltage-clamp recording. A corresponding
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VoltageClampStimulusSeries (stored separately as a stimulus) is used to store
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the voltage injected.
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is_a: PatchClampSeries
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attributes:
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data:
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name: data
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description: Recorded current.
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multivalued: false
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range: VoltageClampSeries_data
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required: true
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capacitance_fast:
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name: capacitance_fast
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description: Fast capacitance, in farads.
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multivalued: false
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range: VoltageClampSeries_capacitance_fast
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required: false
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capacitance_slow:
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name: capacitance_slow
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description: Slow capacitance, in farads.
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multivalued: false
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range: VoltageClampSeries_capacitance_slow
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required: false
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resistance_comp_bandwidth:
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name: resistance_comp_bandwidth
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description: Resistance compensation bandwidth, in hertz.
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multivalued: false
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range: VoltageClampSeries_resistance_comp_bandwidth
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required: false
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resistance_comp_correction:
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name: resistance_comp_correction
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description: Resistance compensation correction, in percent.
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multivalued: false
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range: VoltageClampSeries_resistance_comp_correction
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required: false
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resistance_comp_prediction:
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name: resistance_comp_prediction
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description: Resistance compensation prediction, in percent.
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multivalued: false
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range: VoltageClampSeries_resistance_comp_prediction
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required: false
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whole_cell_capacitance_comp:
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name: whole_cell_capacitance_comp
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description: Whole cell capacitance compensation, in farads.
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multivalued: false
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range: VoltageClampSeries_whole_cell_capacitance_comp
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required: false
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whole_cell_series_resistance_comp:
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name: whole_cell_series_resistance_comp
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description: Whole cell series resistance compensation, in ohms.
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multivalued: false
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range: VoltageClampSeries_whole_cell_series_resistance_comp
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required: false
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VoltageClampSeries_data:
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name: VoltageClampSeries_data
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description: Recorded current.
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attributes:
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unit:
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name: unit
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description: Base unit of measurement for working with the data. which is
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fixed to 'amperes'. Actual stored values are not necessarily stored in these
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units. To access the data in these units, multiply 'data' by 'conversion'
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and add 'offset'.
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range: text
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VoltageClampSeries_capacitance_fast:
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name: VoltageClampSeries_capacitance_fast
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description: Fast capacitance, in farads.
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attributes:
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unit:
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name: unit
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description: Unit of measurement for capacitance_fast, which is fixed to 'farads'.
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range: text
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VoltageClampSeries_capacitance_slow:
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name: VoltageClampSeries_capacitance_slow
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description: Slow capacitance, in farads.
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attributes:
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unit:
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name: unit
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description: Unit of measurement for capacitance_fast, which is fixed to 'farads'.
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range: text
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VoltageClampSeries_resistance_comp_bandwidth:
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name: VoltageClampSeries_resistance_comp_bandwidth
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description: Resistance compensation bandwidth, in hertz.
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attributes:
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unit:
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name: unit
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description: Unit of measurement for resistance_comp_bandwidth, which is fixed
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to 'hertz'.
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range: text
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VoltageClampSeries_resistance_comp_correction:
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name: VoltageClampSeries_resistance_comp_correction
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description: Resistance compensation correction, in percent.
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attributes:
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unit:
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name: unit
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description: Unit of measurement for resistance_comp_correction, which is
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fixed to 'percent'.
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range: text
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VoltageClampSeries_resistance_comp_prediction:
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name: VoltageClampSeries_resistance_comp_prediction
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description: Resistance compensation prediction, in percent.
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attributes:
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unit:
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name: unit
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description: Unit of measurement for resistance_comp_prediction, which is
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fixed to 'percent'.
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range: text
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VoltageClampSeries_whole_cell_capacitance_comp:
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name: VoltageClampSeries_whole_cell_capacitance_comp
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description: Whole cell capacitance compensation, in farads.
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attributes:
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unit:
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name: unit
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description: Unit of measurement for whole_cell_capacitance_comp, which is
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fixed to 'farads'.
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range: text
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VoltageClampSeries_whole_cell_series_resistance_comp:
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name: VoltageClampSeries_whole_cell_series_resistance_comp
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description: Whole cell series resistance compensation, in ohms.
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attributes:
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unit:
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name: unit
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description: Unit of measurement for whole_cell_series_resistance_comp, which
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is fixed to 'ohms'.
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range: text
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VoltageClampStimulusSeries:
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name: VoltageClampStimulusSeries
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description: Stimulus voltage applied during a voltage clamp recording.
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is_a: PatchClampSeries
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attributes:
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data:
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name: data
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description: Stimulus voltage applied.
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multivalued: false
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range: VoltageClampStimulusSeries_data
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required: true
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VoltageClampStimulusSeries_data:
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name: VoltageClampStimulusSeries_data
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description: Stimulus voltage applied.
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attributes:
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unit:
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name: unit
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description: Base unit of measurement for working with the data. which is
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fixed to 'volts'. Actual stored values are not necessarily stored in these
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units. To access the data in these units, multiply 'data' by 'conversion'
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and add 'offset'.
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range: text
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IntracellularElectrode:
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name: IntracellularElectrode
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description: An intracellular electrode and its metadata.
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is_a: NWBContainer
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attributes:
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cell_id:
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name: cell_id
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description: unique ID of the cell
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multivalued: false
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range: IntracellularElectrode_cell_id
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required: false
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description:
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name: description
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description: Description of electrode (e.g., whole-cell, sharp, etc.).
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multivalued: false
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range: IntracellularElectrode_description
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required: true
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filtering:
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name: filtering
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description: Electrode specific filtering.
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multivalued: false
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range: IntracellularElectrode_filtering
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required: false
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initial_access_resistance:
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name: initial_access_resistance
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description: Initial access resistance.
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multivalued: false
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range: IntracellularElectrode_initial_access_resistance
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required: false
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location:
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name: location
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description: Location of the electrode. Specify the area, layer, comments
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on estimation of area/layer, stereotaxic coordinates if in vivo, etc. Use
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standard atlas names for anatomical regions when possible.
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multivalued: false
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range: IntracellularElectrode_location
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required: false
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resistance:
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name: resistance
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description: Electrode resistance, in ohms.
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multivalued: false
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range: IntracellularElectrode_resistance
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required: false
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seal:
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name: seal
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description: Information about seal used for recording.
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multivalued: false
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range: IntracellularElectrode_seal
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required: false
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slice:
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name: slice
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description: Information about slice used for recording.
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multivalued: false
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|
|
range: IntracellularElectrode_slice
|
||
|
|
required: false
|
||
|
|
IntracellularElectrode_cell_id:
|
||
|
|
name: IntracellularElectrode_cell_id
|
||
|
|
description: unique ID of the cell
|
||
|
|
IntracellularElectrode_description:
|
||
|
|
name: IntracellularElectrode_description
|
||
|
|
description: Description of electrode (e.g., whole-cell, sharp, etc.).
|
||
|
|
IntracellularElectrode_filtering:
|
||
|
|
name: IntracellularElectrode_filtering
|
||
|
|
description: Electrode specific filtering.
|
||
|
|
IntracellularElectrode_initial_access_resistance:
|
||
|
|
name: IntracellularElectrode_initial_access_resistance
|
||
|
|
description: Initial access resistance.
|
||
|
|
IntracellularElectrode_location:
|
||
|
|
name: IntracellularElectrode_location
|
||
|
|
description: Location of the electrode. Specify the area, layer, comments on estimation
|
||
|
|
of area/layer, stereotaxic coordinates if in vivo, etc. Use standard atlas names
|
||
|
|
for anatomical regions when possible.
|
||
|
|
IntracellularElectrode_resistance:
|
||
|
|
name: IntracellularElectrode_resistance
|
||
|
|
description: Electrode resistance, in ohms.
|
||
|
|
IntracellularElectrode_seal:
|
||
|
|
name: IntracellularElectrode_seal
|
||
|
|
description: Information about seal used for recording.
|
||
|
|
IntracellularElectrode_slice:
|
||
|
|
name: IntracellularElectrode_slice
|
||
|
|
description: Information about slice used for recording.
|
||
|
|
SweepTable:
|
||
|
|
name: SweepTable
|
||
|
|
description: '[DEPRECATED] Table used to group different PatchClampSeries. SweepTable
|
||
|
|
is being replaced by IntracellularRecordingsTable and SimultaneousRecordingsTable
|
||
|
|
tables. Additional SequentialRecordingsTable, RepetitionsTable, and ExperimentalConditions
|
||
|
|
tables provide enhanced support for experiment metadata.'
|
||
|
|
is_a: DynamicTable
|
||
|
|
attributes:
|
||
|
|
sweep_number:
|
||
|
|
name: sweep_number
|
||
|
|
description: Sweep number of the PatchClampSeries in that row.
|
||
|
|
multivalued: false
|
||
|
|
range: SweepTable_sweep_number
|
||
|
|
required: true
|
||
|
|
series:
|
||
|
|
name: series
|
||
|
|
description: The PatchClampSeries with the sweep number in that row.
|
||
|
|
multivalued: false
|
||
|
|
range: SweepTable_series
|
||
|
|
required: true
|
||
|
|
series_index:
|
||
|
|
name: series_index
|
||
|
|
description: Index for series.
|
||
|
|
multivalued: false
|
||
|
|
range: SweepTable_series_index
|
||
|
|
required: true
|
||
|
|
SweepTable_sweep_number:
|
||
|
|
name: SweepTable_sweep_number
|
||
|
|
description: Sweep number of the PatchClampSeries in that row.
|
||
|
|
is_a: VectorData
|
||
|
|
SweepTable_series:
|
||
|
|
name: SweepTable_series
|
||
|
|
description: The PatchClampSeries with the sweep number in that row.
|
||
|
|
is_a: VectorData
|
||
|
|
SweepTable_series_index:
|
||
|
|
name: SweepTable_series_index
|
||
|
|
description: Index for series.
|
||
|
|
is_a: VectorIndex
|
||
|
|
IntracellularElectrodesTable:
|
||
|
|
name: IntracellularElectrodesTable
|
||
|
|
description: Table for storing intracellular electrode related metadata.
|
||
|
|
is_a: DynamicTable
|
||
|
|
attributes:
|
||
|
|
description:
|
||
|
|
name: description
|
||
|
|
description: Description of what is in this dynamic table.
|
||
|
|
range: text
|
||
|
|
electrode:
|
||
|
|
name: electrode
|
||
|
|
description: Column for storing the reference to the intracellular electrode.
|
||
|
|
multivalued: false
|
||
|
|
range: IntracellularElectrodesTable_electrode
|
||
|
|
required: true
|
||
|
|
IntracellularElectrodesTable_electrode:
|
||
|
|
name: IntracellularElectrodesTable_electrode
|
||
|
|
description: Column for storing the reference to the intracellular electrode.
|
||
|
|
is_a: VectorData
|
||
|
|
IntracellularStimuliTable:
|
||
|
|
name: IntracellularStimuliTable
|
||
|
|
description: Table for storing intracellular stimulus related metadata.
|
||
|
|
is_a: DynamicTable
|
||
|
|
attributes:
|
||
|
|
description:
|
||
|
|
name: description
|
||
|
|
description: Description of what is in this dynamic table.
|
||
|
|
range: text
|
||
|
|
stimulus:
|
||
|
|
name: stimulus
|
||
|
|
description: Column storing the reference to the recorded stimulus for the
|
||
|
|
recording (rows).
|
||
|
|
multivalued: false
|
||
|
|
range: IntracellularStimuliTable_stimulus
|
||
|
|
required: true
|
||
|
|
IntracellularStimuliTable_stimulus:
|
||
|
|
name: IntracellularStimuliTable_stimulus
|
||
|
|
description: Column storing the reference to the recorded stimulus for the recording
|
||
|
|
(rows).
|
||
|
|
is_a: TimeSeriesReferenceVectorData
|
||
|
|
IntracellularResponsesTable:
|
||
|
|
name: IntracellularResponsesTable
|
||
|
|
description: Table for storing intracellular response related metadata.
|
||
|
|
is_a: DynamicTable
|
||
|
|
attributes:
|
||
|
|
description:
|
||
|
|
name: description
|
||
|
|
description: Description of what is in this dynamic table.
|
||
|
|
range: text
|
||
|
|
response:
|
||
|
|
name: response
|
||
|
|
description: Column storing the reference to the recorded response for the
|
||
|
|
recording (rows)
|
||
|
|
multivalued: false
|
||
|
|
range: IntracellularResponsesTable_response
|
||
|
|
required: true
|
||
|
|
IntracellularResponsesTable_response:
|
||
|
|
name: IntracellularResponsesTable_response
|
||
|
|
description: Column storing the reference to the recorded response for the recording
|
||
|
|
(rows)
|
||
|
|
is_a: TimeSeriesReferenceVectorData
|
||
|
|
IntracellularRecordingsTable:
|
||
|
|
name: IntracellularRecordingsTable
|
||
|
|
description: A table to group together a stimulus and response from a single electrode
|
||
|
|
and a single simultaneous recording. Each row in the table represents a single
|
||
|
|
recording consisting typically of a stimulus and a corresponding response. In
|
||
|
|
some cases, however, only a stimulus or a response is recorded as part of an
|
||
|
|
experiment. In this case, both the stimulus and response will point to the same
|
||
|
|
TimeSeries while the idx_start and count of the invalid column will be set to
|
||
|
|
-1, thus, indicating that no values have been recorded for the stimulus or response,
|
||
|
|
respectively. Note, a recording MUST contain at least a stimulus or a response.
|
||
|
|
Typically the stimulus and response are PatchClampSeries. However, the use of
|
||
|
|
AD/DA channels that are not associated to an electrode is also common in intracellular
|
||
|
|
electrophysiology, in which case other TimeSeries may be used.
|
||
|
|
is_a: AlignedDynamicTable
|
||
|
|
attributes:
|
||
|
|
description:
|
||
|
|
name: description
|
||
|
|
description: Description of the contents of this table. Inherited from AlignedDynamicTable
|
||
|
|
and overwritten here to fix the value of the attribute.
|
||
|
|
range: text
|
||
|
|
electrodes:
|
||
|
|
name: electrodes
|
||
|
|
description: Table for storing intracellular electrode related metadata.
|
||
|
|
multivalued: false
|
||
|
|
range: IntracellularRecordingsTable_electrodes
|
||
|
|
required: true
|
||
|
|
stimuli:
|
||
|
|
name: stimuli
|
||
|
|
description: Table for storing intracellular stimulus related metadata.
|
||
|
|
multivalued: false
|
||
|
|
range: IntracellularRecordingsTable_stimuli
|
||
|
|
required: true
|
||
|
|
responses:
|
||
|
|
name: responses
|
||
|
|
description: Table for storing intracellular response related metadata.
|
||
|
|
multivalued: false
|
||
|
|
range: IntracellularRecordingsTable_responses
|
||
|
|
required: true
|
||
|
|
IntracellularRecordingsTable_electrodes:
|
||
|
|
name: IntracellularRecordingsTable_electrodes
|
||
|
|
description: Table for storing intracellular electrode related metadata.
|
||
|
|
is_a: IntracellularElectrodesTable
|
||
|
|
IntracellularRecordingsTable_stimuli:
|
||
|
|
name: IntracellularRecordingsTable_stimuli
|
||
|
|
description: Table for storing intracellular stimulus related metadata.
|
||
|
|
is_a: IntracellularStimuliTable
|
||
|
|
IntracellularRecordingsTable_responses:
|
||
|
|
name: IntracellularRecordingsTable_responses
|
||
|
|
description: Table for storing intracellular response related metadata.
|
||
|
|
is_a: IntracellularResponsesTable
|
||
|
|
SimultaneousRecordingsTable:
|
||
|
|
name: SimultaneousRecordingsTable
|
||
|
|
description: A table for grouping different intracellular recordings from the
|
||
|
|
IntracellularRecordingsTable table together that were recorded simultaneously
|
||
|
|
from different electrodes.
|
||
|
|
is_a: DynamicTable
|
||
|
|
attributes:
|
||
|
|
recordings:
|
||
|
|
name: recordings
|
||
|
|
description: A reference to one or more rows in the IntracellularRecordingsTable
|
||
|
|
table.
|
||
|
|
multivalued: false
|
||
|
|
range: SimultaneousRecordingsTable_recordings
|
||
|
|
required: true
|
||
|
|
recordings_index:
|
||
|
|
name: recordings_index
|
||
|
|
description: Index dataset for the recordings column.
|
||
|
|
multivalued: false
|
||
|
|
range: SimultaneousRecordingsTable_recordings_index
|
||
|
|
required: true
|
||
|
|
SimultaneousRecordingsTable_recordings:
|
||
|
|
name: SimultaneousRecordingsTable_recordings
|
||
|
|
description: A reference to one or more rows in the IntracellularRecordingsTable
|
||
|
|
table.
|
||
|
|
is_a: DynamicTableRegion
|
||
|
|
attributes:
|
||
|
|
table:
|
||
|
|
name: table
|
||
|
|
description: Reference to the IntracellularRecordingsTable table that this
|
||
|
|
table region applies to. This specializes the attribute inherited from DynamicTableRegion
|
||
|
|
to fix the type of table that can be referenced here.
|
||
|
|
range: IntracellularRecordingsTable
|
||
|
|
SimultaneousRecordingsTable_recordings_index:
|
||
|
|
name: SimultaneousRecordingsTable_recordings_index
|
||
|
|
description: Index dataset for the recordings column.
|
||
|
|
is_a: VectorIndex
|
||
|
|
SequentialRecordingsTable:
|
||
|
|
name: SequentialRecordingsTable
|
||
|
|
description: A table for grouping different sequential recordings from the SimultaneousRecordingsTable
|
||
|
|
table together. This is typically used to group together sequential recordings
|
||
|
|
where a sequence of stimuli of the same type with varying parameters have been
|
||
|
|
presented in a sequence.
|
||
|
|
is_a: DynamicTable
|
||
|
|
attributes:
|
||
|
|
simultaneous_recordings:
|
||
|
|
name: simultaneous_recordings
|
||
|
|
description: A reference to one or more rows in the SimultaneousRecordingsTable
|
||
|
|
table.
|
||
|
|
multivalued: false
|
||
|
|
range: SequentialRecordingsTable_simultaneous_recordings
|
||
|
|
required: true
|
||
|
|
simultaneous_recordings_index:
|
||
|
|
name: simultaneous_recordings_index
|
||
|
|
description: Index dataset for the simultaneous_recordings column.
|
||
|
|
multivalued: false
|
||
|
|
range: SequentialRecordingsTable_simultaneous_recordings_index
|
||
|
|
required: true
|
||
|
|
stimulus_type:
|
||
|
|
name: stimulus_type
|
||
|
|
description: The type of stimulus used for the sequential recording.
|
||
|
|
multivalued: false
|
||
|
|
range: SequentialRecordingsTable_stimulus_type
|
||
|
|
required: true
|
||
|
|
SequentialRecordingsTable_simultaneous_recordings:
|
||
|
|
name: SequentialRecordingsTable_simultaneous_recordings
|
||
|
|
description: A reference to one or more rows in the SimultaneousRecordingsTable
|
||
|
|
table.
|
||
|
|
is_a: DynamicTableRegion
|
||
|
|
attributes:
|
||
|
|
table:
|
||
|
|
name: table
|
||
|
|
description: Reference to the SimultaneousRecordingsTable table that this
|
||
|
|
table region applies to. This specializes the attribute inherited from DynamicTableRegion
|
||
|
|
to fix the type of table that can be referenced here.
|
||
|
|
range: SimultaneousRecordingsTable
|
||
|
|
SequentialRecordingsTable_simultaneous_recordings_index:
|
||
|
|
name: SequentialRecordingsTable_simultaneous_recordings_index
|
||
|
|
description: Index dataset for the simultaneous_recordings column.
|
||
|
|
is_a: VectorIndex
|
||
|
|
SequentialRecordingsTable_stimulus_type:
|
||
|
|
name: SequentialRecordingsTable_stimulus_type
|
||
|
|
description: The type of stimulus used for the sequential recording.
|
||
|
|
is_a: VectorData
|
||
|
|
RepetitionsTable:
|
||
|
|
name: RepetitionsTable
|
||
|
|
description: A table for grouping different sequential intracellular recordings
|
||
|
|
together. With each SequentialRecording typically representing a particular
|
||
|
|
type of stimulus, the RepetitionsTable table is typically used to group sets
|
||
|
|
of stimuli applied in sequence.
|
||
|
|
is_a: DynamicTable
|
||
|
|
attributes:
|
||
|
|
sequential_recordings:
|
||
|
|
name: sequential_recordings
|
||
|
|
description: A reference to one or more rows in the SequentialRecordingsTable
|
||
|
|
table.
|
||
|
|
multivalued: false
|
||
|
|
range: RepetitionsTable_sequential_recordings
|
||
|
|
required: true
|
||
|
|
sequential_recordings_index:
|
||
|
|
name: sequential_recordings_index
|
||
|
|
description: Index dataset for the sequential_recordings column.
|
||
|
|
multivalued: false
|
||
|
|
range: RepetitionsTable_sequential_recordings_index
|
||
|
|
required: true
|
||
|
|
RepetitionsTable_sequential_recordings:
|
||
|
|
name: RepetitionsTable_sequential_recordings
|
||
|
|
description: A reference to one or more rows in the SequentialRecordingsTable
|
||
|
|
table.
|
||
|
|
is_a: DynamicTableRegion
|
||
|
|
attributes:
|
||
|
|
table:
|
||
|
|
name: table
|
||
|
|
description: Reference to the SequentialRecordingsTable table that this table
|
||
|
|
region applies to. This specializes the attribute inherited from DynamicTableRegion
|
||
|
|
to fix the type of table that can be referenced here.
|
||
|
|
range: SequentialRecordingsTable
|
||
|
|
RepetitionsTable_sequential_recordings_index:
|
||
|
|
name: RepetitionsTable_sequential_recordings_index
|
||
|
|
description: Index dataset for the sequential_recordings column.
|
||
|
|
is_a: VectorIndex
|
||
|
|
ExperimentalConditionsTable:
|
||
|
|
name: ExperimentalConditionsTable
|
||
|
|
description: A table for grouping different intracellular recording repetitions
|
||
|
|
together that belong to the same experimental condition.
|
||
|
|
is_a: DynamicTable
|
||
|
|
attributes:
|
||
|
|
repetitions:
|
||
|
|
name: repetitions
|
||
|
|
description: A reference to one or more rows in the RepetitionsTable table.
|
||
|
|
multivalued: false
|
||
|
|
range: ExperimentalConditionsTable_repetitions
|
||
|
|
required: true
|
||
|
|
repetitions_index:
|
||
|
|
name: repetitions_index
|
||
|
|
description: Index dataset for the repetitions column.
|
||
|
|
multivalued: false
|
||
|
|
range: ExperimentalConditionsTable_repetitions_index
|
||
|
|
required: true
|
||
|
|
ExperimentalConditionsTable_repetitions:
|
||
|
|
name: ExperimentalConditionsTable_repetitions
|
||
|
|
description: A reference to one or more rows in the RepetitionsTable table.
|
||
|
|
is_a: DynamicTableRegion
|
||
|
|
attributes:
|
||
|
|
table:
|
||
|
|
name: table
|
||
|
|
description: Reference to the RepetitionsTable table that this table region
|
||
|
|
applies to. This specializes the attribute inherited from DynamicTableRegion
|
||
|
|
to fix the type of table that can be referenced here.
|
||
|
|
range: RepetitionsTable
|
||
|
|
ExperimentalConditionsTable_repetitions_index:
|
||
|
|
name: ExperimentalConditionsTable_repetitions_index
|
||
|
|
description: Index dataset for the repetitions column.
|
||
|
|
is_a: VectorIndex
|