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trying to debug on CI by abusing warnings lol

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sneakers-the-rat 2023-10-11 21:49:45 -07:00
parent 282acc063e
commit 3164f92387
1 changed files with 6 additions and 1 deletions
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7
nwb_linkml/src/nwb_linkml/providers/schema.py
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@ -40,6 +40,7 @@ so eg. for the linkML and pydantic providers:
""" """
import pdb import pdb
import shutil import shutil
from pprint import pformat
from typing import Dict, TypedDict, List, Optional, Literal, TypeVar, Any, Dict, Type, Callable from typing import Dict, TypedDict, List, Optional, Literal, TypeVar, Any, Dict, Type, Callable
from types import ModuleType from types import ModuleType
from pathlib import Path from pathlib import Path
@ -391,6 +392,10 @@ class LinkMLProvider(Provider):
build_result = {} build_result = {}
namespace_sch = [sch for sch in built.schemas if 'is_namespace' in sch.annotations and sch.annotations['is_namespace'].value == 'True'] namespace_sch = [sch for sch in built.schemas if 'is_namespace' in sch.annotations and sch.annotations['is_namespace'].value == 'True']
warnings.warn('WITHIN SCHEMA PROVIDER BUILD')
warnings.warn(pformat(namespace_sch))
warnings.warn('-------')
warnings.warn(pformat(built))
for ns_linkml in namespace_sch: for ns_linkml in namespace_sch:
version = ns_adapter.versions[ns_linkml.name] version = ns_adapter.versions[ns_linkml.name]
version_path = self.namespace_path(ns_linkml.name, version, allow_repo=False) version_path = self.namespace_path(ns_linkml.name, version, allow_repo=False)
@ -402,7 +407,7 @@ class LinkMLProvider(Provider):
other_schema = [sch for sch in built.schemas if other_schema = [sch for sch in built.schemas if
sch.name.split('.')[0] == ns_linkml.name and sch not in namespace_sch] sch.name.split('.')[0] == ns_linkml.name and sch not in namespace_sch]
if force or (not force and not ns_file.exists()): if force or not ns_file.exists():
ns_linkml = self._fix_schema_imports(ns_linkml, ns_adapter, ns_file) ns_linkml = self._fix_schema_imports(ns_linkml, ns_adapter, ns_file)
yaml_dumper.dump(ns_linkml, ns_file) yaml_dumper.dump(ns_linkml, ns_file)