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exclude building vector_data slot, force rebuild of older models which apparently wasn't happening...

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This commit is contained in:
sneakers-the-rat 2024-10-02 20:20:34 -07:00
parent 8f95d55790
commit 8449e9f742
Signed by untrusted user who does not match committer: jonny
GPG key ID: 6DCB96EF1E4D232D
3 changed files with 6 additions and 6 deletions
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6
nwb_linkml/src/nwb_linkml/adapters/dataset.py
View file

@ -642,7 +642,7 @@ class MapNVectors(DatasetMap):
cls.name is None
and cls.neurodata_type_def is None
and cls.neurodata_type_inc
and cls.neurodata_type_inc != "VectorData"
and cls.neurodata_type_inc not in ("VectorData", "VectorIndex")
and cls.quantity in ("*", "+")
)
@ -681,10 +681,10 @@ class MapNVectorData(DatasetMap):
Check for being an unnamed multivalued vector class that IS VectorData
"""
return (
(cls.name is None or cls.name == "vector_data")
(cls.name is None or cls.name in ("vector_data", "vector_index"))
and cls.neurodata_type_def is None
and cls.neurodata_type_inc
and cls.neurodata_type_inc == "VectorData"
and cls.neurodata_type_inc in ("VectorData", "VectorIndex")
and cls.quantity in ("*", "+")
)

2
nwb_linkml/src/nwb_linkml/adapters/group.py
View file

@ -230,7 +230,7 @@ class GroupAdapter(ClassAdapter):
)
if self.debug: # pragma: no cover - only used in development
slot.annotations["group_adapter"] = {
slot.annotations["slot_adapter"] = {
"tag": "slot_adapter",
"value": "container_value_slot",
}

4
scripts/generate_core.py
View file

@ -102,7 +102,7 @@ def generate_versions(
build_progress.update(linkml_task, advance=1, action="Build LinkML")
linkml_res = linkml_provider.build(core_ns)
linkml_res = linkml_provider.build(core_ns, force=True)
build_progress.update(linkml_task, advance=1, action="Built LinkML")
# build pydantic
@ -115,7 +115,7 @@ def generate_versions(
pbar_string = schema.parts[-3]
build_progress.update(pydantic_task, action=pbar_string)
pydantic_provider.build(
schema, versions=core_ns.versions, split=True, parallel=True
schema, versions=core_ns.versions, split=True, parallel=True, force=True
)
build_progress.update(pydantic_task, advance=1)
build_progress.update(pydantic_task, action="Built Pydantic")