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give language elements a schema annotation

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sneakers-the-rat 2023-10-11 20:09:22 -07:00
parent d9d62618bc
commit d4493146b5
1 changed files with 5 additions and 1 deletions
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6
nwb_linkml/src/nwb_linkml/adapters/namespaces.py
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@ -10,7 +10,7 @@ from typing import List, Optional, Dict
from pathlib import Path
from pydantic import BaseModel, Field, validator, PrivateAttr
from pprint import pformat
from linkml_runtime.linkml_model import SchemaDefinition
from linkml_runtime.linkml_model import SchemaDefinition, Annotation
from linkml_runtime.dumpers import yaml_dumper
from time import sleep
from copy import copy
@ -97,6 +97,10 @@ class NamespacesAdapter(Adapter):
# add in monkeypatch nwb types
nwb_lang = copy(NwbLangSchema)
nwb_lang.annotations = {
'is_namespace': Annotation(tag='is_namespace', value= 'False'),
'namespace': Annotation(tag='namespace', value= ns.name)
}
lang_schema_name = '.'.join([ns.name, 'nwb.language'])
nwb_lang.name = lang_schema_name
sch_result.schemas.append(nwb_lang)