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regenerate models with numpydantic

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This commit is contained in:
sneakers-the-rat 2024-07-08 19:29:48 -07:00
parent 8036b3316d
commit fdf80666fb
Signed by untrusted user who does not match committer: jonny
GPG key ID: 6DCB96EF1E4D232D
171 changed files with 742 additions and 5162 deletions
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4
nwb_linkml/src/nwb_linkml/generators/pydantic.py
View file

@ -93,8 +93,8 @@ from pydantic import BaseModel as BaseModel, Field"""
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
""" """
template += """ template += """
from nptyping import Shape, Float, Float32, Double, Float64, LongLong, Int64, Int, Int32, Int16, Short, Int8, UInt, UInt32, UInt16, UInt8, UInt64, Number, String, Unicode, Unicode, Unicode, String, Bool, Datetime64 from numpydantic import Shape, NDArray
from nwb_linkml.types import NDArray from numpydantic.dtype import *
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
from typing import Literal from typing import Literal

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_0/core_nwb_base.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,7 +27,7 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from ...hdmf_common.v1_1_0.hdmf_common_table import Data, Container, DynamicTable from ...hdmf_common.v1_1_0.hdmf_common_table import Container, Data, DynamicTable
metamodel_version = "None" metamodel_version = "None"

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_0/core_nwb_behavior.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -55,9 +29,9 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
NWBDataInterface, NWBDataInterface,
TimeSeries,
TimeSeriesStartingTime, TimeSeriesStartingTime,
TimeSeriesSync, TimeSeriesSync,
TimeSeries,
) )
from .core_nwb_misc import IntervalSeries from .core_nwb_misc import IntervalSeries

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_0/core_nwb_device.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

36
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_0/core_nwb_ecephys.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -55,13 +29,13 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
NWBDataInterface, NWBDataInterface,
TimeSeriesStartingTime,
TimeSeriesSync,
TimeSeries, TimeSeries,
TimeSeriesStartingTime,
NWBContainer, NWBContainer,
TimeSeriesSync,
) )
from ...hdmf_common.v1_1_0.hdmf_common_table import DynamicTable, DynamicTableRegion from ...hdmf_common.v1_1_0.hdmf_common_table import DynamicTableRegion, DynamicTable
metamodel_version = "None" metamodel_version = "None"

36
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_0/core_nwb_epoch.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,14 +27,14 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_base import TimeSeries
from ...hdmf_common.v1_1_0.hdmf_common_table import ( from ...hdmf_common.v1_1_0.hdmf_common_table import (
DynamicTable,
VectorIndex, VectorIndex,
VectorData, VectorData,
DynamicTable,
) )
from .core_nwb_base import TimeSeries
metamodel_version = "None" metamodel_version = "None"
version = "2.2.0" version = "2.2.0"

48
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_0/core_nwb_file.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,27 +27,27 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_device import Device
from .core_nwb_ecephys import ElectrodeGroup
from .core_nwb_ophys import ImagingPlane from .core_nwb_ophys import ImagingPlane
from .core_nwb_icephys import IntracellularElectrode, SweepTable from .core_nwb_base import TimeSeries, NWBDataInterface, ProcessingModule, NWBContainer
from .core_nwb_base import NWBContainer, TimeSeries, NWBDataInterface, ProcessingModule
from .core_nwb_epoch import TimeIntervals from .core_nwb_epoch import TimeIntervals
from ...hdmf_common.v1_1_0.hdmf_common_table import ( from ...hdmf_common.v1_1_0.hdmf_common_table import (
DynamicTable, DynamicTable,
VectorIndex,
VectorData, VectorData,
VectorIndex,
) )
from .core_nwb_icephys import IntracellularElectrode, SweepTable
from .core_nwb_ogen import OptogeneticStimulusSite
from .core_nwb_misc import Units from .core_nwb_misc import Units
from .core_nwb_ogen import OptogeneticStimulusSite from .core_nwb_ecephys import ElectrodeGroup
from .core_nwb_device import Device
metamodel_version = "None" metamodel_version = "None"

36
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_0/core_nwb_icephys.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -54,16 +28,16 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
TimeSeriesStartingTime,
NWBContainer,
TimeSeries, TimeSeries,
TimeSeriesSync, TimeSeriesSync,
TimeSeriesStartingTime,
NWBContainer,
) )
from ...hdmf_common.v1_1_0.hdmf_common_table import ( from ...hdmf_common.v1_1_0.hdmf_common_table import (
DynamicTable, DynamicTable,
VectorIndex,
VectorData, VectorData,
VectorIndex,
) )

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_0/core_nwb_image.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,7 +27,7 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_base import Image, TimeSeriesStartingTime, TimeSeriesSync, TimeSeries from .core_nwb_base import Image, TimeSeries, TimeSeriesStartingTime, TimeSeriesSync
metamodel_version = "None" metamodel_version = "None"

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_0/core_nwb_language.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

38
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_0/core_nwb_misc.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,15 +27,15 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_base import TimeSeries, TimeSeriesStartingTime, TimeSeriesSync
from ...hdmf_common.v1_1_0.hdmf_common_table import ( from ...hdmf_common.v1_1_0.hdmf_common_table import (
DynamicTableRegion,
DynamicTable,
VectorIndex, VectorIndex,
VectorData, VectorData,
DynamicTable,
DynamicTableRegion,
) )
from .core_nwb_base import TimeSeriesStartingTime, TimeSeriesSync, TimeSeries
from .core_nwb_ecephys import ElectrodeGroup from .core_nwb_ecephys import ElectrodeGroup

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_0/core_nwb_ogen.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -55,8 +29,8 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
TimeSeriesSync, TimeSeriesSync,
NWBContainer,
TimeSeries, TimeSeries,
NWBContainer,
TimeSeriesStartingTime, TimeSeriesStartingTime,
) )

38
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_0/core_nwb_ophys.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,17 +27,17 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from ...hdmf_common.v1_1_0.hdmf_common_table import DynamicTable, DynamicTableRegion
from .core_nwb_base import ( from .core_nwb_base import (
NWBDataInterface, NWBDataInterface,
TimeSeriesStartingTime, TimeSeriesStartingTime,
TimeSeriesSync,
TimeSeries, TimeSeries,
NWBContainer, NWBContainer,
TimeSeriesSync,
) )
from .core_nwb_image import ImageSeriesExternalFile, ImageSeries from .core_nwb_image import ImageSeries, ImageSeriesExternalFile
from ...hdmf_common.v1_1_0.hdmf_common_table import DynamicTable, DynamicTableRegion
metamodel_version = "None" metamodel_version = "None"

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_0/core_nwb_retinotopy.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_0/namespace.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_1/core_nwb_base.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,7 +27,7 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from ...hdmf_common.v1_1_2.hdmf_common_table import Data, Container, DynamicTable from ...hdmf_common.v1_1_2.hdmf_common_table import Container, Data, DynamicTable
metamodel_version = "None" metamodel_version = "None"

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_1/core_nwb_behavior.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -55,9 +29,9 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
NWBDataInterface, NWBDataInterface,
TimeSeries,
TimeSeriesStartingTime, TimeSeriesStartingTime,
TimeSeriesSync, TimeSeriesSync,
TimeSeries,
) )
from .core_nwb_misc import IntervalSeries from .core_nwb_misc import IntervalSeries

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_1/core_nwb_device.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

36
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_1/core_nwb_ecephys.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -55,13 +29,13 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
NWBDataInterface, NWBDataInterface,
TimeSeriesStartingTime,
TimeSeriesSync,
TimeSeries, TimeSeries,
TimeSeriesStartingTime,
NWBContainer, NWBContainer,
TimeSeriesSync,
) )
from ...hdmf_common.v1_1_2.hdmf_common_table import DynamicTable, DynamicTableRegion from ...hdmf_common.v1_1_2.hdmf_common_table import DynamicTableRegion, DynamicTable
metamodel_version = "None" metamodel_version = "None"

36
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_1/core_nwb_epoch.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,14 +27,14 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_base import TimeSeries
from ...hdmf_common.v1_1_2.hdmf_common_table import ( from ...hdmf_common.v1_1_2.hdmf_common_table import (
DynamicTable,
VectorIndex, VectorIndex,
VectorData, VectorData,
DynamicTable,
) )
from .core_nwb_base import TimeSeries
metamodel_version = "None" metamodel_version = "None"
version = "2.2.1" version = "2.2.1"

48
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_1/core_nwb_file.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,27 +27,27 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_device import Device
from .core_nwb_ecephys import ElectrodeGroup
from .core_nwb_ophys import ImagingPlane from .core_nwb_ophys import ImagingPlane
from .core_nwb_icephys import IntracellularElectrode, SweepTable from .core_nwb_base import TimeSeries, NWBDataInterface, ProcessingModule, NWBContainer
from .core_nwb_base import NWBContainer, TimeSeries, NWBDataInterface, ProcessingModule
from .core_nwb_epoch import TimeIntervals from .core_nwb_epoch import TimeIntervals
from ...hdmf_common.v1_1_2.hdmf_common_table import ( from ...hdmf_common.v1_1_2.hdmf_common_table import (
DynamicTable, DynamicTable,
VectorIndex,
VectorData, VectorData,
VectorIndex,
) )
from .core_nwb_icephys import IntracellularElectrode, SweepTable
from .core_nwb_ogen import OptogeneticStimulusSite
from .core_nwb_misc import Units from .core_nwb_misc import Units
from .core_nwb_ogen import OptogeneticStimulusSite from .core_nwb_ecephys import ElectrodeGroup
from .core_nwb_device import Device
metamodel_version = "None" metamodel_version = "None"

36
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_1/core_nwb_icephys.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -54,16 +28,16 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
TimeSeriesStartingTime,
NWBContainer,
TimeSeries, TimeSeries,
TimeSeriesSync, TimeSeriesSync,
TimeSeriesStartingTime,
NWBContainer,
) )
from ...hdmf_common.v1_1_2.hdmf_common_table import ( from ...hdmf_common.v1_1_2.hdmf_common_table import (
DynamicTable, DynamicTable,
VectorIndex,
VectorData, VectorData,
VectorIndex,
) )

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_1/core_nwb_image.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,7 +27,7 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_base import Image, TimeSeriesStartingTime, TimeSeriesSync, TimeSeries from .core_nwb_base import Image, TimeSeries, TimeSeriesStartingTime, TimeSeriesSync
metamodel_version = "None" metamodel_version = "None"

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_1/core_nwb_language.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

38
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_1/core_nwb_misc.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,15 +27,15 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_base import TimeSeries, TimeSeriesStartingTime, TimeSeriesSync
from ...hdmf_common.v1_1_2.hdmf_common_table import ( from ...hdmf_common.v1_1_2.hdmf_common_table import (
DynamicTableRegion,
DynamicTable,
VectorIndex, VectorIndex,
VectorData, VectorData,
DynamicTable,
DynamicTableRegion,
) )
from .core_nwb_base import TimeSeriesStartingTime, TimeSeriesSync, TimeSeries
from .core_nwb_ecephys import ElectrodeGroup from .core_nwb_ecephys import ElectrodeGroup

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_1/core_nwb_ogen.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -55,8 +29,8 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
TimeSeriesSync, TimeSeriesSync,
NWBContainer,
TimeSeries, TimeSeries,
NWBContainer,
TimeSeriesStartingTime, TimeSeriesStartingTime,
) )

38
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_1/core_nwb_ophys.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,17 +27,17 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from ...hdmf_common.v1_1_2.hdmf_common_table import DynamicTable, DynamicTableRegion
from .core_nwb_base import ( from .core_nwb_base import (
NWBDataInterface, NWBDataInterface,
TimeSeriesStartingTime, TimeSeriesStartingTime,
TimeSeriesSync,
TimeSeries, TimeSeries,
NWBContainer, NWBContainer,
TimeSeriesSync,
) )
from .core_nwb_image import ImageSeriesExternalFile, ImageSeries from .core_nwb_image import ImageSeries, ImageSeriesExternalFile
from ...hdmf_common.v1_1_2.hdmf_common_table import DynamicTable, DynamicTableRegion
metamodel_version = "None" metamodel_version = "None"

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_1/core_nwb_retinotopy.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_1/namespace.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_2/core_nwb_base.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,7 +27,7 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from ...hdmf_common.v1_1_3.hdmf_common_table import Data, Container, DynamicTable from ...hdmf_common.v1_1_3.hdmf_common_table import Container, Data, DynamicTable
metamodel_version = "None" metamodel_version = "None"

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_2/core_nwb_behavior.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -55,9 +29,9 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
NWBDataInterface, NWBDataInterface,
TimeSeries,
TimeSeriesStartingTime, TimeSeriesStartingTime,
TimeSeriesSync, TimeSeriesSync,
TimeSeries,
) )
from .core_nwb_misc import IntervalSeries from .core_nwb_misc import IntervalSeries

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_2/core_nwb_device.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

36
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_2/core_nwb_ecephys.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -55,13 +29,13 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
NWBDataInterface, NWBDataInterface,
TimeSeriesStartingTime,
TimeSeriesSync,
TimeSeries, TimeSeries,
TimeSeriesStartingTime,
NWBContainer, NWBContainer,
TimeSeriesSync,
) )
from ...hdmf_common.v1_1_3.hdmf_common_table import DynamicTable, DynamicTableRegion from ...hdmf_common.v1_1_3.hdmf_common_table import DynamicTableRegion, DynamicTable
metamodel_version = "None" metamodel_version = "None"

36
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_2/core_nwb_epoch.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,14 +27,14 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_base import TimeSeries
from ...hdmf_common.v1_1_3.hdmf_common_table import ( from ...hdmf_common.v1_1_3.hdmf_common_table import (
DynamicTable,
VectorIndex, VectorIndex,
VectorData, VectorData,
DynamicTable,
) )
from .core_nwb_base import TimeSeries
metamodel_version = "None" metamodel_version = "None"
version = "2.2.2" version = "2.2.2"

48
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_2/core_nwb_file.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,27 +27,27 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_device import Device
from .core_nwb_ecephys import ElectrodeGroup
from .core_nwb_ophys import ImagingPlane from .core_nwb_ophys import ImagingPlane
from .core_nwb_icephys import IntracellularElectrode, SweepTable from .core_nwb_base import TimeSeries, NWBDataInterface, ProcessingModule, NWBContainer
from .core_nwb_base import NWBContainer, TimeSeries, NWBDataInterface, ProcessingModule
from .core_nwb_epoch import TimeIntervals from .core_nwb_epoch import TimeIntervals
from ...hdmf_common.v1_1_3.hdmf_common_table import ( from ...hdmf_common.v1_1_3.hdmf_common_table import (
DynamicTable, DynamicTable,
VectorIndex,
VectorData, VectorData,
VectorIndex,
) )
from .core_nwb_icephys import IntracellularElectrode, SweepTable
from .core_nwb_ogen import OptogeneticStimulusSite
from .core_nwb_misc import Units from .core_nwb_misc import Units
from .core_nwb_ogen import OptogeneticStimulusSite from .core_nwb_ecephys import ElectrodeGroup
from .core_nwb_device import Device
metamodel_version = "None" metamodel_version = "None"

36
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_2/core_nwb_icephys.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -54,16 +28,16 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
TimeSeriesStartingTime,
NWBContainer,
TimeSeries, TimeSeries,
TimeSeriesSync, TimeSeriesSync,
TimeSeriesStartingTime,
NWBContainer,
) )
from ...hdmf_common.v1_1_3.hdmf_common_table import ( from ...hdmf_common.v1_1_3.hdmf_common_table import (
DynamicTable, DynamicTable,
VectorIndex,
VectorData, VectorData,
VectorIndex,
) )

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_2/core_nwb_image.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,7 +27,7 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_base import Image, TimeSeriesStartingTime, TimeSeriesSync, TimeSeries from .core_nwb_base import Image, TimeSeries, TimeSeriesStartingTime, TimeSeriesSync
metamodel_version = "None" metamodel_version = "None"

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_2/core_nwb_language.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

38
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_2/core_nwb_misc.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,15 +27,15 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_base import TimeSeries, TimeSeriesStartingTime, TimeSeriesSync
from ...hdmf_common.v1_1_3.hdmf_common_table import ( from ...hdmf_common.v1_1_3.hdmf_common_table import (
DynamicTableRegion,
DynamicTable,
VectorIndex, VectorIndex,
VectorData, VectorData,
DynamicTable,
DynamicTableRegion,
) )
from .core_nwb_base import TimeSeriesStartingTime, TimeSeriesSync, TimeSeries
from .core_nwb_ecephys import ElectrodeGroup from .core_nwb_ecephys import ElectrodeGroup

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_2/core_nwb_ogen.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -55,8 +29,8 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
TimeSeriesSync, TimeSeriesSync,
NWBContainer,
TimeSeries, TimeSeries,
NWBContainer,
TimeSeriesStartingTime, TimeSeriesStartingTime,
) )

38
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_2/core_nwb_ophys.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,17 +27,17 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from ...hdmf_common.v1_1_3.hdmf_common_table import DynamicTable, DynamicTableRegion
from .core_nwb_base import ( from .core_nwb_base import (
NWBDataInterface, NWBDataInterface,
TimeSeriesStartingTime, TimeSeriesStartingTime,
TimeSeriesSync,
TimeSeries, TimeSeries,
NWBContainer, NWBContainer,
TimeSeriesSync,
) )
from .core_nwb_image import ImageSeriesExternalFile, ImageSeries from .core_nwb_image import ImageSeries, ImageSeriesExternalFile
from ...hdmf_common.v1_1_3.hdmf_common_table import DynamicTable, DynamicTableRegion
metamodel_version = "None" metamodel_version = "None"

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_2/core_nwb_retinotopy.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_2/namespace.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_4/core_nwb_base.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,7 +27,7 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from ...hdmf_common.v1_1_3.hdmf_common_table import Data, Container, DynamicTable from ...hdmf_common.v1_1_3.hdmf_common_table import Container, Data, DynamicTable
metamodel_version = "None" metamodel_version = "None"

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_4/core_nwb_behavior.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -55,9 +29,9 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
NWBDataInterface, NWBDataInterface,
TimeSeries,
TimeSeriesStartingTime, TimeSeriesStartingTime,
TimeSeriesSync, TimeSeriesSync,
TimeSeries,
) )
from .core_nwb_misc import IntervalSeries from .core_nwb_misc import IntervalSeries

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_4/core_nwb_device.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

36
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_4/core_nwb_ecephys.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -55,13 +29,13 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
NWBDataInterface, NWBDataInterface,
TimeSeriesStartingTime,
TimeSeriesSync,
TimeSeries, TimeSeries,
TimeSeriesStartingTime,
NWBContainer, NWBContainer,
TimeSeriesSync,
) )
from ...hdmf_common.v1_1_3.hdmf_common_table import DynamicTable, DynamicTableRegion from ...hdmf_common.v1_1_3.hdmf_common_table import DynamicTableRegion, DynamicTable
metamodel_version = "None" metamodel_version = "None"

36
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_4/core_nwb_epoch.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,14 +27,14 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_base import TimeSeries
from ...hdmf_common.v1_1_3.hdmf_common_table import ( from ...hdmf_common.v1_1_3.hdmf_common_table import (
DynamicTable,
VectorIndex, VectorIndex,
VectorData, VectorData,
DynamicTable,
) )
from .core_nwb_base import TimeSeries
metamodel_version = "None" metamodel_version = "None"
version = "2.2.4" version = "2.2.4"

50
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_4/core_nwb_file.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,33 +27,33 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_device import Device
from .core_nwb_ecephys import ElectrodeGroup
from .core_nwb_ophys import ImagingPlane from .core_nwb_ophys import ImagingPlane
from .core_nwb_icephys import IntracellularElectrode, SweepTable
from .core_nwb_base import ( from .core_nwb_base import (
NWBContainer,
NWBData,
TimeSeries, TimeSeries,
NWBDataInterface, NWBDataInterface,
ProcessingModule, ProcessingModule,
NWBContainer,
NWBData,
) )
from .core_nwb_epoch import TimeIntervals from .core_nwb_epoch import TimeIntervals
from ...hdmf_common.v1_1_3.hdmf_common_table import ( from ...hdmf_common.v1_1_3.hdmf_common_table import (
DynamicTable, DynamicTable,
VectorIndex,
VectorData, VectorData,
VectorIndex,
) )
from .core_nwb_icephys import IntracellularElectrode, SweepTable
from .core_nwb_ogen import OptogeneticStimulusSite
from .core_nwb_misc import Units from .core_nwb_misc import Units
from .core_nwb_ogen import OptogeneticStimulusSite from .core_nwb_ecephys import ElectrodeGroup
from .core_nwb_device import Device
metamodel_version = "None" metamodel_version = "None"

36
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_4/core_nwb_icephys.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -54,16 +28,16 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
TimeSeriesStartingTime,
NWBContainer,
TimeSeries, TimeSeries,
TimeSeriesSync, TimeSeriesSync,
TimeSeriesStartingTime,
NWBContainer,
) )
from ...hdmf_common.v1_1_3.hdmf_common_table import ( from ...hdmf_common.v1_1_3.hdmf_common_table import (
DynamicTable, DynamicTable,
VectorIndex,
VectorData, VectorData,
VectorIndex,
) )

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_4/core_nwb_image.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,7 +27,7 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_base import Image, TimeSeriesStartingTime, TimeSeriesSync, TimeSeries from .core_nwb_base import Image, TimeSeries, TimeSeriesStartingTime, TimeSeriesSync
metamodel_version = "None" metamodel_version = "None"

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_4/core_nwb_language.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

38
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_4/core_nwb_misc.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,15 +27,15 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_base import TimeSeries, TimeSeriesStartingTime, TimeSeriesSync
from ...hdmf_common.v1_1_3.hdmf_common_table import ( from ...hdmf_common.v1_1_3.hdmf_common_table import (
DynamicTableRegion,
DynamicTable,
VectorIndex, VectorIndex,
VectorData, VectorData,
DynamicTable,
DynamicTableRegion,
) )
from .core_nwb_base import TimeSeriesStartingTime, TimeSeriesSync, TimeSeries
from .core_nwb_ecephys import ElectrodeGroup from .core_nwb_ecephys import ElectrodeGroup

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_4/core_nwb_ogen.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -55,8 +29,8 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
TimeSeriesSync, TimeSeriesSync,
NWBContainer,
TimeSeries, TimeSeries,
NWBContainer,
TimeSeriesStartingTime, TimeSeriesStartingTime,
) )

50
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_4/core_nwb_ophys.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -54,22 +28,22 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
TimeSeries,
TimeSeriesSync,
NWBDataInterface,
TimeSeriesStartingTime, TimeSeriesStartingTime,
NWBContainer, NWBContainer,
TimeSeries, )
NWBDataInterface,
TimeSeriesSync, from ...hdmf_common.v1_1_3.hdmf_common_table import (
DynamicTableRegion,
DynamicTable,
VectorData,
VectorIndex,
) )
from .core_nwb_image import ImageSeries, ImageSeriesExternalFile from .core_nwb_image import ImageSeries, ImageSeriesExternalFile
from ...hdmf_common.v1_1_3.hdmf_common_table import (
DynamicTable,
DynamicTableRegion,
VectorIndex,
VectorData,
)
metamodel_version = "None" metamodel_version = "None"
version = "2.2.4" version = "2.2.4"

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_4/core_nwb_retinotopy.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_4/namespace.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_5/core_nwb_base.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,7 +27,7 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from ...hdmf_common.v1_1_3.hdmf_common_table import Data, Container, DynamicTable from ...hdmf_common.v1_1_3.hdmf_common_table import Container, Data, DynamicTable
metamodel_version = "None" metamodel_version = "None"

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_5/core_nwb_behavior.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -55,9 +29,9 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
NWBDataInterface, NWBDataInterface,
TimeSeries,
TimeSeriesStartingTime, TimeSeriesStartingTime,
TimeSeriesSync, TimeSeriesSync,
TimeSeries,
) )
from .core_nwb_misc import IntervalSeries from .core_nwb_misc import IntervalSeries

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_5/core_nwb_device.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

36
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_5/core_nwb_ecephys.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -55,13 +29,13 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
NWBDataInterface, NWBDataInterface,
TimeSeriesStartingTime,
TimeSeriesSync,
TimeSeries, TimeSeries,
TimeSeriesStartingTime,
NWBContainer, NWBContainer,
TimeSeriesSync,
) )
from ...hdmf_common.v1_1_3.hdmf_common_table import DynamicTable, DynamicTableRegion from ...hdmf_common.v1_1_3.hdmf_common_table import DynamicTableRegion, DynamicTable
metamodel_version = "None" metamodel_version = "None"

36
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_5/core_nwb_epoch.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,14 +27,14 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_base import TimeSeries
from ...hdmf_common.v1_1_3.hdmf_common_table import ( from ...hdmf_common.v1_1_3.hdmf_common_table import (
DynamicTable,
VectorIndex, VectorIndex,
VectorData, VectorData,
DynamicTable,
) )
from .core_nwb_base import TimeSeries
metamodel_version = "None" metamodel_version = "None"
version = "2.2.5" version = "2.2.5"

50
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_5/core_nwb_file.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,33 +27,33 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_device import Device
from .core_nwb_ecephys import ElectrodeGroup
from .core_nwb_ophys import ImagingPlane from .core_nwb_ophys import ImagingPlane
from .core_nwb_icephys import IntracellularElectrode, SweepTable
from .core_nwb_base import ( from .core_nwb_base import (
NWBContainer,
NWBData,
TimeSeries, TimeSeries,
NWBDataInterface, NWBDataInterface,
ProcessingModule, ProcessingModule,
NWBContainer,
NWBData,
) )
from .core_nwb_epoch import TimeIntervals from .core_nwb_epoch import TimeIntervals
from ...hdmf_common.v1_1_3.hdmf_common_table import ( from ...hdmf_common.v1_1_3.hdmf_common_table import (
DynamicTable, DynamicTable,
VectorIndex,
VectorData, VectorData,
VectorIndex,
) )
from .core_nwb_icephys import IntracellularElectrode, SweepTable
from .core_nwb_ogen import OptogeneticStimulusSite
from .core_nwb_misc import Units from .core_nwb_misc import Units
from .core_nwb_ogen import OptogeneticStimulusSite from .core_nwb_ecephys import ElectrodeGroup
from .core_nwb_device import Device
metamodel_version = "None" metamodel_version = "None"

36
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_5/core_nwb_icephys.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -54,16 +28,16 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
TimeSeriesStartingTime,
NWBContainer,
TimeSeries, TimeSeries,
TimeSeriesSync, TimeSeriesSync,
TimeSeriesStartingTime,
NWBContainer,
) )
from ...hdmf_common.v1_1_3.hdmf_common_table import ( from ...hdmf_common.v1_1_3.hdmf_common_table import (
DynamicTable, DynamicTable,
VectorIndex,
VectorData, VectorData,
VectorIndex,
) )

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_5/core_nwb_image.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,7 +27,7 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_base import Image, TimeSeriesStartingTime, TimeSeriesSync, TimeSeries from .core_nwb_base import Image, TimeSeries, TimeSeriesStartingTime, TimeSeriesSync
metamodel_version = "None" metamodel_version = "None"

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_5/core_nwb_language.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

38
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_5/core_nwb_misc.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,15 +27,15 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_base import TimeSeries, TimeSeriesStartingTime, TimeSeriesSync
from ...hdmf_common.v1_1_3.hdmf_common_table import ( from ...hdmf_common.v1_1_3.hdmf_common_table import (
DynamicTableRegion,
DynamicTable,
VectorIndex, VectorIndex,
VectorData, VectorData,
DynamicTable,
DynamicTableRegion,
) )
from .core_nwb_base import TimeSeriesStartingTime, TimeSeriesSync, TimeSeries
from .core_nwb_ecephys import ElectrodeGroup from .core_nwb_ecephys import ElectrodeGroup

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_5/core_nwb_ogen.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -55,8 +29,8 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
TimeSeriesSync, TimeSeriesSync,
NWBContainer,
TimeSeries, TimeSeries,
NWBContainer,
TimeSeriesStartingTime, TimeSeriesStartingTime,
) )

50
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_5/core_nwb_ophys.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -54,22 +28,22 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
TimeSeries,
TimeSeriesSync,
NWBDataInterface,
TimeSeriesStartingTime, TimeSeriesStartingTime,
NWBContainer, NWBContainer,
TimeSeries, )
NWBDataInterface,
TimeSeriesSync, from ...hdmf_common.v1_1_3.hdmf_common_table import (
DynamicTableRegion,
DynamicTable,
VectorData,
VectorIndex,
) )
from .core_nwb_image import ImageSeries, ImageSeriesExternalFile from .core_nwb_image import ImageSeries, ImageSeriesExternalFile
from ...hdmf_common.v1_1_3.hdmf_common_table import (
DynamicTable,
DynamicTableRegion,
VectorIndex,
VectorData,
)
metamodel_version = "None" metamodel_version = "None"
version = "2.2.5" version = "2.2.5"

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_5/core_nwb_retinotopy.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_2_5/namespace.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_3_0/core_nwb_base.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,7 +27,7 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from ...hdmf_common.v1_5_0.hdmf_common_base import Data, Container from ...hdmf_common.v1_5_0.hdmf_common_base import Container, Data
from ...hdmf_common.v1_5_0.hdmf_common_table import DynamicTable from ...hdmf_common.v1_5_0.hdmf_common_table import DynamicTable

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_3_0/core_nwb_behavior.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -55,9 +29,9 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
NWBDataInterface, NWBDataInterface,
TimeSeries,
TimeSeriesStartingTime, TimeSeriesStartingTime,
TimeSeriesSync, TimeSeriesSync,
TimeSeries,
) )
from .core_nwb_misc import IntervalSeries from .core_nwb_misc import IntervalSeries

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_3_0/core_nwb_device.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

36
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_3_0/core_nwb_ecephys.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -55,13 +29,13 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
NWBDataInterface, NWBDataInterface,
TimeSeriesStartingTime,
TimeSeriesSync,
TimeSeries, TimeSeries,
TimeSeriesStartingTime,
NWBContainer, NWBContainer,
TimeSeriesSync,
) )
from ...hdmf_common.v1_5_0.hdmf_common_table import DynamicTable, DynamicTableRegion from ...hdmf_common.v1_5_0.hdmf_common_table import DynamicTableRegion, DynamicTable
metamodel_version = "None" metamodel_version = "None"

36
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_3_0/core_nwb_epoch.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,14 +27,14 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_base import TimeSeries
from ...hdmf_common.v1_5_0.hdmf_common_table import ( from ...hdmf_common.v1_5_0.hdmf_common_table import (
DynamicTable,
VectorIndex, VectorIndex,
VectorData, VectorData,
DynamicTable,
) )
from .core_nwb_base import TimeSeries
metamodel_version = "None" metamodel_version = "None"
version = "2.3.0" version = "2.3.0"

48
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_3_0/core_nwb_file.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,30 +27,30 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_device import Device
from .core_nwb_ecephys import ElectrodeGroup
from .core_nwb_ophys import ImagingPlane from .core_nwb_ophys import ImagingPlane
from .core_nwb_icephys import IntracellularElectrode, SweepTable
from .core_nwb_base import ( from .core_nwb_base import (
NWBContainer,
NWBData,
TimeSeries, TimeSeries,
NWBDataInterface, NWBDataInterface,
ProcessingModule, ProcessingModule,
NWBContainer,
NWBData,
) )
from .core_nwb_epoch import TimeIntervals from .core_nwb_epoch import TimeIntervals
from ...hdmf_common.v1_5_0.hdmf_common_table import DynamicTable, VectorData from ...hdmf_common.v1_5_0.hdmf_common_table import DynamicTable, VectorData
from .core_nwb_misc import Units from .core_nwb_icephys import IntracellularElectrode, SweepTable
from .core_nwb_ogen import OptogeneticStimulusSite from .core_nwb_ogen import OptogeneticStimulusSite
from .core_nwb_misc import Units
from .core_nwb_ecephys import ElectrodeGroup
from .core_nwb_device import Device
metamodel_version = "None" metamodel_version = "None"
version = "2.3.0" version = "2.3.0"

36
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_3_0/core_nwb_icephys.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -54,16 +28,16 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
TimeSeriesStartingTime,
NWBContainer,
TimeSeries, TimeSeries,
TimeSeriesSync, TimeSeriesSync,
TimeSeriesStartingTime,
NWBContainer,
) )
from ...hdmf_common.v1_5_0.hdmf_common_table import ( from ...hdmf_common.v1_5_0.hdmf_common_table import (
DynamicTable, DynamicTable,
VectorIndex,
VectorData, VectorData,
VectorIndex,
) )

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_3_0/core_nwb_image.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,7 +27,7 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_base import Image, TimeSeriesStartingTime, TimeSeriesSync, TimeSeries from .core_nwb_base import Image, TimeSeries, TimeSeriesStartingTime, TimeSeriesSync
metamodel_version = "None" metamodel_version = "None"

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_3_0/core_nwb_language.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

40
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_3_0/core_nwb_misc.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,17 +27,17 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_base import TimeSeriesStartingTime, TimeSeries, TimeSeriesSync from .core_nwb_base import TimeSeries, TimeSeriesSync, TimeSeriesStartingTime
from .core_nwb_ecephys import ElectrodeGroup
from ...hdmf_common.v1_5_0.hdmf_common_table import ( from ...hdmf_common.v1_5_0.hdmf_common_table import (
DynamicTable,
DynamicTableRegion, DynamicTableRegion,
VectorIndex, DynamicTable,
VectorData, VectorData,
VectorIndex,
) )
from .core_nwb_ecephys import ElectrodeGroup
metamodel_version = "None" metamodel_version = "None"
version = "2.3.0" version = "2.3.0"

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_3_0/core_nwb_ogen.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -55,8 +29,8 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
TimeSeriesSync, TimeSeriesSync,
NWBContainer,
TimeSeries, TimeSeries,
NWBContainer,
TimeSeriesStartingTime, TimeSeriesStartingTime,
) )

50
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_3_0/core_nwb_ophys.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -54,22 +28,22 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
TimeSeries,
TimeSeriesSync,
NWBDataInterface,
TimeSeriesStartingTime, TimeSeriesStartingTime,
NWBContainer, NWBContainer,
TimeSeries, )
NWBDataInterface,
TimeSeriesSync, from ...hdmf_common.v1_5_0.hdmf_common_table import (
DynamicTableRegion,
DynamicTable,
VectorData,
VectorIndex,
) )
from .core_nwb_image import ImageSeries, ImageSeriesExternalFile from .core_nwb_image import ImageSeries, ImageSeriesExternalFile
from ...hdmf_common.v1_5_0.hdmf_common_table import (
DynamicTable,
DynamicTableRegion,
VectorIndex,
VectorData,
)
metamodel_version = "None" metamodel_version = "None"
version = "2.3.0" version = "2.3.0"

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_3_0/core_nwb_retinotopy.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_3_0/namespace.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

34
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_4_0/core_nwb_base.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,9 +27,9 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from ...hdmf_common.v1_5_0.hdmf_common_base import Data, Container from ...hdmf_common.v1_5_0.hdmf_common_table import DynamicTable, VectorData
from ...hdmf_common.v1_5_0.hdmf_common_table import VectorData, DynamicTable from ...hdmf_common.v1_5_0.hdmf_common_base import Container, Data
metamodel_version = "None" metamodel_version = "None"

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_4_0/core_nwb_behavior.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -55,9 +29,9 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
NWBDataInterface, NWBDataInterface,
TimeSeries,
TimeSeriesStartingTime, TimeSeriesStartingTime,
TimeSeriesSync, TimeSeriesSync,
TimeSeries,
) )
from .core_nwb_misc import IntervalSeries from .core_nwb_misc import IntervalSeries

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_4_0/core_nwb_device.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

36
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_4_0/core_nwb_ecephys.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -55,13 +29,13 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
NWBDataInterface, NWBDataInterface,
TimeSeriesStartingTime,
TimeSeriesSync,
TimeSeries, TimeSeries,
TimeSeriesStartingTime,
NWBContainer, NWBContainer,
TimeSeriesSync,
) )
from ...hdmf_common.v1_5_0.hdmf_common_table import DynamicTable, DynamicTableRegion from ...hdmf_common.v1_5_0.hdmf_common_table import DynamicTableRegion, DynamicTable
metamodel_version = "None" metamodel_version = "None"

36
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_4_0/core_nwb_epoch.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,14 +27,14 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_base import TimeSeries
from ...hdmf_common.v1_5_0.hdmf_common_table import ( from ...hdmf_common.v1_5_0.hdmf_common_table import (
DynamicTable,
VectorIndex, VectorIndex,
VectorData, VectorData,
DynamicTable,
) )
from .core_nwb_base import TimeSeries
metamodel_version = "None" metamodel_version = "None"
version = "2.4.0" version = "2.4.0"

64
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_4_0/core_nwb_file.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,38 +27,38 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_icephys import (
SequentialRecordingsTable,
IntracellularRecordingsTable,
SimultaneousRecordingsTable,
IntracellularElectrode,
ExperimentalConditionsTable,
SweepTable,
RepetitionsTable,
)
from .core_nwb_device import Device
from .core_nwb_ecephys import ElectrodeGroup
from .core_nwb_ophys import ImagingPlane from .core_nwb_ophys import ImagingPlane
from .core_nwb_base import ( from .core_nwb_base import (
NWBContainer,
NWBData,
TimeSeries, TimeSeries,
NWBDataInterface, NWBDataInterface,
ProcessingModule, ProcessingModule,
NWBContainer,
NWBData,
) )
from .core_nwb_epoch import TimeIntervals from .core_nwb_epoch import TimeIntervals
from ...hdmf_common.v1_5_0.hdmf_common_table import DynamicTable, VectorData from ...hdmf_common.v1_5_0.hdmf_common_table import DynamicTable, VectorData
from .core_nwb_misc import Units from .core_nwb_icephys import (
RepetitionsTable,
IntracellularElectrode,
SequentialRecordingsTable,
IntracellularRecordingsTable,
SweepTable,
ExperimentalConditionsTable,
SimultaneousRecordingsTable,
)
from .core_nwb_ogen import OptogeneticStimulusSite from .core_nwb_ogen import OptogeneticStimulusSite
from .core_nwb_misc import Units
from .core_nwb_ecephys import ElectrodeGroup
from .core_nwb_device import Device
metamodel_version = "None" metamodel_version = "None"
version = "2.4.0" version = "2.4.0"

40
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_4_0/core_nwb_icephys.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -54,19 +28,19 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
TimeSeriesStartingTime,
NWBContainer,
TimeSeries, TimeSeries,
TimeSeriesSync, TimeSeriesSync,
TimeSeriesStartingTime,
NWBContainer,
TimeSeriesReferenceVectorData, TimeSeriesReferenceVectorData,
) )
from ...hdmf_common.v1_5_0.hdmf_common_table import ( from ...hdmf_common.v1_5_0.hdmf_common_table import (
DynamicTable,
DynamicTableRegion, DynamicTableRegion,
VectorIndex, DynamicTable,
VectorData,
AlignedDynamicTable, AlignedDynamicTable,
VectorData,
VectorIndex,
) )

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_4_0/core_nwb_image.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,7 +27,7 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_base import Image, TimeSeriesStartingTime, TimeSeriesSync, TimeSeries from .core_nwb_base import Image, TimeSeries, TimeSeriesStartingTime, TimeSeriesSync
metamodel_version = "None" metamodel_version = "None"

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_4_0/core_nwb_language.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

40
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_4_0/core_nwb_misc.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,17 +27,17 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from .core_nwb_base import TimeSeriesStartingTime, TimeSeries, TimeSeriesSync from .core_nwb_base import TimeSeries, TimeSeriesSync, TimeSeriesStartingTime
from .core_nwb_ecephys import ElectrodeGroup
from ...hdmf_common.v1_5_0.hdmf_common_table import ( from ...hdmf_common.v1_5_0.hdmf_common_table import (
DynamicTable,
DynamicTableRegion, DynamicTableRegion,
VectorIndex, DynamicTable,
VectorData, VectorData,
VectorIndex,
) )
from .core_nwb_ecephys import ElectrodeGroup
metamodel_version = "None" metamodel_version = "None"
version = "2.4.0" version = "2.4.0"

32
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_4_0/core_nwb_ogen.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -55,8 +29,8 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
TimeSeriesSync, TimeSeriesSync,
NWBContainer,
TimeSeries, TimeSeries,
NWBContainer,
TimeSeriesStartingTime, TimeSeriesStartingTime,
) )

50
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_4_0/core_nwb_ophys.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -54,22 +28,22 @@ if TYPE_CHECKING:
from .core_nwb_base import ( from .core_nwb_base import (
TimeSeries,
TimeSeriesSync,
NWBDataInterface,
TimeSeriesStartingTime, TimeSeriesStartingTime,
NWBContainer, NWBContainer,
TimeSeries, )
NWBDataInterface,
TimeSeriesSync, from ...hdmf_common.v1_5_0.hdmf_common_table import (
DynamicTableRegion,
DynamicTable,
VectorData,
VectorIndex,
) )
from .core_nwb_image import ImageSeries, ImageSeriesExternalFile from .core_nwb_image import ImageSeries, ImageSeriesExternalFile
from ...hdmf_common.v1_5_0.hdmf_common_table import (
DynamicTable,
DynamicTableRegion,
VectorIndex,
VectorData,
)
metamodel_version = "None" metamodel_version = "None"
version = "2.4.0" version = "2.4.0"

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_4_0/core_nwb_retinotopy.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

30
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_4_0/namespace.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):

34
nwb_linkml/src/nwb_linkml/models/pydantic/core/v2_5_0/core_nwb_base.py
View file

@ -15,34 +15,8 @@ from typing import (
from pydantic import BaseModel as BaseModel, Field from pydantic import BaseModel as BaseModel, Field
from pydantic import ConfigDict, BeforeValidator from pydantic import ConfigDict, BeforeValidator
from nptyping import ( from numpydantic import Shape, NDArray
Shape, from numpydantic.dtype import *
Float,
Float32,
Double,
Float64,
LongLong,
Int64,
Int,
Int32,
Int16,
Short,
Int8,
UInt,
UInt32,
UInt16,
UInt8,
UInt64,
Number,
String,
Unicode,
Unicode,
Unicode,
String,
Bool,
Datetime64,
)
from nwb_linkml.types import NDArray
import sys import sys
if sys.version_info >= (3, 8): if sys.version_info >= (3, 8):
@ -53,9 +27,9 @@ if TYPE_CHECKING:
import numpy as np import numpy as np
from ...hdmf_common.v1_5_0.hdmf_common_base import Data, Container from ...hdmf_common.v1_5_0.hdmf_common_table import DynamicTable, VectorData
from ...hdmf_common.v1_5_0.hdmf_common_table import VectorData, DynamicTable from ...hdmf_common.v1_5_0.hdmf_common_base import Container, Data
metamodel_version = "None" metamodel_version = "None"

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