mirror of
https://github.com/p2p-ld/nwb-linkml.git
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patch pydantic code generation, use anytype for dims because modeling lists of lists is not possible
This commit is contained in:
parent
63ccd800b3
commit
fe44c1c657
8 changed files with 149 additions and 151 deletions
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@ -108,6 +108,7 @@ gen-project: $(PYMODEL)
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gen-pydantic: $(PYMODEL)
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gen-pydantic: $(PYMODEL)
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$(RUN) gen-pydantic $(SOURCE_SCHEMA_PATH) --pydantic_version 1 > $(PYMODEL)/nwb_schema_pydantic.py
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$(RUN) gen-pydantic $(SOURCE_SCHEMA_PATH) --pydantic_version 1 > $(PYMODEL)/nwb_schema_pydantic.py
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$(RUN) run_patches --phase post_generation
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test: test-schema test-python test-examples
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test: test-schema test-python test-examples
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175
nwb-schema-language/poetry.lock
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175
nwb-schema-language/poetry.lock
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@ -1,16 +1,5 @@
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# This file is automatically @generated by Poetry 1.5.1 and should not be changed by hand.
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# This file is automatically @generated by Poetry 1.5.1 and should not be changed by hand.
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[[package]]
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name = "annotated-types"
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version = "0.5.0"
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description = "Reusable constraint types to use with typing.Annotated"
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optional = false
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python-versions = ">=3.7"
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files = [
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{file = "annotated_types-0.5.0.tar.gz", hash = "sha256:47cdc3490d9ac1506ce92c7aaa76c579dc3509ff11e098fc867e5130ab7be802"},
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]
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[[package]]
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[[package]]
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name = "antlr4-python3-runtime"
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name = "antlr4-python3-runtime"
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version = "4.9.3"
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version = "4.9.3"
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@ -1362,135 +1351,55 @@ pyasn1 = ">=0.4.6,<0.6.0"
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[[package]]
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[[package]]
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name = "pydantic"
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name = "pydantic"
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version = "2.1.1"
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version = "1.10.12"
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description = "Data validation using Python type hints"
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description = "Data validation and settings management using python type hints"
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optional = false
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optional = false
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python-versions = ">=3.7"
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python-versions = ">=3.7"
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]
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]
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[package.dependencies]
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[package.dependencies]
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annotated-types = ">=0.4.0"
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typing-extensions = ">=4.2.0"
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pydantic-core = "2.4.0"
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typing-extensions = ">=4.6.1"
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[package.extras]
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[package.extras]
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email = ["email-validator (>=2.0.0)"]
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dotenv = ["python-dotenv (>=0.10.4)"]
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email = ["email-validator (>=1.0.3)"]
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[[package]]
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name = "pydantic-core"
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version = "2.4.0"
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description = ""
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optional = false
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python-versions = ">=3.7"
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||||||
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||||||
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|
||||||
{file = "pydantic_core-2.4.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:ffe18407a4d000c568182ce5388bbbedeb099896904e43fc14eee76cfae6dec5"},
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|
||||||
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|
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|
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{file = "pydantic_core-2.4.0-cp38-none-win32.whl", hash = "sha256:0d726108c1c0380b88b6dd4db559f0280e0ceda9e077f46ff90bc85cd4d03e77"},
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||||||
{file = "pydantic_core-2.4.0-cp38-none-win_amd64.whl", hash = "sha256:047580388644c473b934d27849f8ed8dbe45df0adb72104e78b543e13bf69762"},
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{file = "pydantic_core-2.4.0-cp39-cp39-macosx_11_0_arm64.whl", hash = "sha256:664402ef0c238a7f8a46efb101789d5f2275600fb18114446efec83cfadb5b66"},
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{file = "pydantic_core-2.4.0-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:64e8012ad60a5f0da09ed48725e6e923d1be25f2f091a640af6079f874663813"},
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|
||||||
{file = "pydantic_core-2.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:ac2b680de398f293b68183317432b3d67ab3faeba216aec18de0c395cb5e3060"},
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{file = "pydantic_core-2.4.0-cp39-cp39-manylinux_2_24_armv7l.whl", hash = "sha256:8efc1be43b036c2b6bcfb1451df24ee0ddcf69c31351003daf2699ed93f5687b"},
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|
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{file = "pydantic_core-2.4.0-cp39-cp39-manylinux_2_24_ppc64le.whl", hash = "sha256:d93aedbc4614cc21b9ab0d0c4ccd7143354c1f7cffbbe96ae5216ad21d1b21b5"},
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{file = "pydantic_core-2.4.0-cp39-cp39-manylinux_2_24_s390x.whl", hash = "sha256:af788b64e13d52fc3600a68b16d31fa8d8573e3ff2fc9a38f8a60b8d94d1f012"},
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|
||||||
{file = "pydantic_core-2.4.0-cp39-cp39-manylinux_2_5_i686.manylinux1_i686.whl", hash = "sha256:97c6349c81cee2e69ef59eba6e6c08c5936e6b01c2d50b9e4ac152217845ae09"},
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|
||||||
{file = "pydantic_core-2.4.0-cp39-cp39-musllinux_1_1_aarch64.whl", hash = "sha256:cc086ddb6dc654a15deeed1d1f2bcb1cb924ebd70df9dca738af19f64229b06c"},
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|
||||||
{file = "pydantic_core-2.4.0-cp39-cp39-musllinux_1_1_x86_64.whl", hash = "sha256:e953353180bec330c3b830891d260b6f8e576e2d18db3c78d314e56bb2276066"},
|
|
||||||
{file = "pydantic_core-2.4.0-cp39-none-win32.whl", hash = "sha256:6feb4b64d11d5420e517910d60a907d08d846cacaf4e029668725cd21d16743c"},
|
|
||||||
{file = "pydantic_core-2.4.0-cp39-none-win_amd64.whl", hash = "sha256:153a61ac4030fa019b70b31fb7986461119230d3ba0ab661c757cfea652f4332"},
|
|
||||||
{file = "pydantic_core-2.4.0-pp310-pypy310_pp73-macosx_10_7_x86_64.whl", hash = "sha256:3fcf529382b282a30b466bd7af05be28e22aa620e016135ac414f14e1ee6b9e1"},
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|
||||||
{file = "pydantic_core-2.4.0-pp310-pypy310_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:2edef05b63d82568b877002dc4cb5cc18f8929b59077120192df1e03e0c633f8"},
|
|
||||||
{file = "pydantic_core-2.4.0-pp310-pypy310_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:da055a1b0bfa8041bb2ff586b2cb0353ed03944a3472186a02cc44a557a0e661"},
|
|
||||||
{file = "pydantic_core-2.4.0-pp310-pypy310_pp73-manylinux_2_5_i686.manylinux1_i686.whl", hash = "sha256:77dadc764cf7c5405e04866181c5bd94a447372a9763e473abb63d1dfe9b7387"},
|
|
||||||
{file = "pydantic_core-2.4.0-pp310-pypy310_pp73-musllinux_1_1_aarch64.whl", hash = "sha256:a4ea23b07f29487a7bef2a869f68c7ee0e05424d81375ce3d3de829314c6b5ec"},
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|
||||||
{file = "pydantic_core-2.4.0-pp310-pypy310_pp73-musllinux_1_1_x86_64.whl", hash = "sha256:382f0baa044d674ad59455a5eff83d7965572b745cc72df35c52c2ce8c731d37"},
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|
||||||
{file = "pydantic_core-2.4.0-pp310-pypy310_pp73-win_amd64.whl", hash = "sha256:08f89697625e453421401c7f661b9d1eb4c9e4c0a12fd256eeb55b06994ac6af"},
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|
||||||
{file = "pydantic_core-2.4.0-pp37-pypy37_pp73-macosx_10_7_x86_64.whl", hash = "sha256:43a405ce520b45941df9ff55d0cd09762017756a7b413bbad3a6e8178e64a2c2"},
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|
||||||
{file = "pydantic_core-2.4.0-pp37-pypy37_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:584a7a818c84767af16ce8bda5d4f7fedb37d3d231fc89928a192f567e4ef685"},
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|
||||||
{file = "pydantic_core-2.4.0-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:04922fea7b13cd480586fa106345fe06e43220b8327358873c22d8dfa7a711c7"},
|
|
||||||
{file = "pydantic_core-2.4.0-pp37-pypy37_pp73-manylinux_2_5_i686.manylinux1_i686.whl", hash = "sha256:17156abac20a9feed10feec867fddd91a80819a485b0107fe61f09f2117fe5f3"},
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|
||||||
{file = "pydantic_core-2.4.0-pp37-pypy37_pp73-musllinux_1_1_aarch64.whl", hash = "sha256:4e562cc63b04636cde361fd47569162f1daa94c759220ff202a8129902229114"},
|
|
||||||
{file = "pydantic_core-2.4.0-pp37-pypy37_pp73-musllinux_1_1_x86_64.whl", hash = "sha256:90f3785146f701e053bb6b9e8f53acce2c919aca91df88bd4975be0cb926eb41"},
|
|
||||||
{file = "pydantic_core-2.4.0-pp37-pypy37_pp73-win_amd64.whl", hash = "sha256:e40b1e97edd3dc127aa53d8a5e539a3d0c227d71574d3f9ac1af02d58218a122"},
|
|
||||||
{file = "pydantic_core-2.4.0-pp38-pypy38_pp73-macosx_10_7_x86_64.whl", hash = "sha256:b27f3e67f6e031f6620655741b7d0d6bebea8b25d415924b3e8bfef2dd7bd841"},
|
|
||||||
{file = "pydantic_core-2.4.0-pp38-pypy38_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:be86c2eb12fb0f846262ace9d8f032dc6978b8cb26a058920ecb723dbcb87d05"},
|
|
||||||
{file = "pydantic_core-2.4.0-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:4665f7ed345012a8d2eddf4203ef145f5f56a291d010382d235b94e91813f88a"},
|
|
||||||
{file = "pydantic_core-2.4.0-pp38-pypy38_pp73-manylinux_2_5_i686.manylinux1_i686.whl", hash = "sha256:79262be5a292d1df060f29b9a7cdd66934801f987a817632d7552534a172709a"},
|
|
||||||
{file = "pydantic_core-2.4.0-pp38-pypy38_pp73-musllinux_1_1_aarch64.whl", hash = "sha256:5fd905a69ac74eaba5041e21a1e8b1a479dab2b41c93bdcc4c1cede3c12a8d86"},
|
|
||||||
{file = "pydantic_core-2.4.0-pp38-pypy38_pp73-musllinux_1_1_x86_64.whl", hash = "sha256:2ad538b7e07343001934417cdc8584623b4d8823c5b8b258e75ec8d327cec969"},
|
|
||||||
{file = "pydantic_core-2.4.0-pp38-pypy38_pp73-win_amd64.whl", hash = "sha256:dd2429f7635ad4857b5881503f9c310be7761dc681c467a9d27787b674d1250a"},
|
|
||||||
{file = "pydantic_core-2.4.0-pp39-pypy39_pp73-macosx_10_7_x86_64.whl", hash = "sha256:efff8b6761a1f6e45cebd1b7a6406eb2723d2d5710ff0d1b624fe11313693989"},
|
|
||||||
{file = "pydantic_core-2.4.0-pp39-pypy39_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:32a1e0352558cd7ccc014ffe818c7d87b15ec6145875e2cc5fa4bb7351a1033d"},
|
|
||||||
{file = "pydantic_core-2.4.0-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:a027f41c5008571314861744d83aff75a34cf3a07022e0be32b214a5bc93f7f1"},
|
|
||||||
{file = "pydantic_core-2.4.0-pp39-pypy39_pp73-manylinux_2_5_i686.manylinux1_i686.whl", hash = "sha256:1927f0e15d190f11f0b8344373731e28fd774c6d676d8a6cfadc95c77214a48b"},
|
|
||||||
{file = "pydantic_core-2.4.0-pp39-pypy39_pp73-musllinux_1_1_aarch64.whl", hash = "sha256:7aa82d483d5fb867d4fb10a138ffd57b0f1644e99f2f4f336e48790ada9ada5e"},
|
|
||||||
{file = "pydantic_core-2.4.0-pp39-pypy39_pp73-musllinux_1_1_x86_64.whl", hash = "sha256:b85778308bf945e9b33ac604e6793df9b07933108d20bdf53811bc7c2798a4af"},
|
|
||||||
{file = "pydantic_core-2.4.0-pp39-pypy39_pp73-win_amd64.whl", hash = "sha256:3ded19dcaefe2f6706d81e0db787b59095f4ad0fbadce1edffdf092294c8a23f"},
|
|
||||||
{file = "pydantic_core-2.4.0.tar.gz", hash = "sha256:ec3473c9789cc00c7260d840c3db2c16dbfc816ca70ec87a00cddfa3e1a1cdd5"},
|
|
||||||
]
|
|
||||||
|
|
||||||
[package.dependencies]
|
|
||||||
typing-extensions = ">=4.6.0,<4.7.0 || >4.7.0"
|
|
||||||
|
|
||||||
[[package]]
|
[[package]]
|
||||||
name = "pygments"
|
name = "pygments"
|
||||||
|
|
@ -2518,4 +2427,4 @@ docs = []
|
||||||
[metadata]
|
[metadata]
|
||||||
lock-version = "2.0"
|
lock-version = "2.0"
|
||||||
python-versions = "^3.9"
|
python-versions = "^3.9"
|
||||||
content-hash = "45ab0641686b3572e070cc39ae4a66ac504af0e079ac7e36c12fdaee200a1f11"
|
content-hash = "7f1c4bbcfac50aaa741976f74d8ceac46ba630ea5ed649b90184f9698c05d536"
|
||||||
|
|
|
||||||
|
|
@ -13,6 +13,7 @@ include = ["README.md", "src/nwb_schema_language/schema", "project"]
|
||||||
[tool.poetry.dependencies]
|
[tool.poetry.dependencies]
|
||||||
python = "^3.9"
|
python = "^3.9"
|
||||||
linkml-runtime = "^1.1.24"
|
linkml-runtime = "^1.1.24"
|
||||||
|
pydantic = "<2"
|
||||||
|
|
||||||
[tool.poetry-dynamic-versioning]
|
[tool.poetry-dynamic-versioning]
|
||||||
enable = true
|
enable = true
|
||||||
|
|
@ -25,6 +26,9 @@ mkdocs-material = "^8.2.8"
|
||||||
mkdocs-mermaid2-plugin = "^0.6.0"
|
mkdocs-mermaid2-plugin = "^0.6.0"
|
||||||
schemasheets = "^0.1.14"
|
schemasheets = "^0.1.14"
|
||||||
|
|
||||||
|
[tool.poetry.scripts]
|
||||||
|
run_patches = 'nwb_schema_language.patches:main'
|
||||||
|
|
||||||
[build-system]
|
[build-system]
|
||||||
requires = ["poetry-core>=1.0.0", "poetry-dynamic-versioning"]
|
requires = ["poetry-core>=1.0.0", "poetry-dynamic-versioning"]
|
||||||
build-backend = "poetry_dynamic_versioning.backend"
|
build-backend = "poetry_dynamic_versioning.backend"
|
||||||
|
|
|
||||||
|
|
@ -1,3 +1,5 @@
|
||||||
|
import warnings
|
||||||
|
try:
|
||||||
from .datamodel.nwb_schema_pydantic import Namespace, \
|
from .datamodel.nwb_schema_pydantic import Namespace, \
|
||||||
Namespaces, \
|
Namespaces, \
|
||||||
Schema, \
|
Schema, \
|
||||||
|
|
@ -7,3 +9,5 @@ from .datamodel.nwb_schema_pydantic import Namespace, \
|
||||||
Dataset, \
|
Dataset, \
|
||||||
ReferenceDtype, \
|
ReferenceDtype, \
|
||||||
CompoundDtype
|
CompoundDtype
|
||||||
|
except NameError:
|
||||||
|
warnings.warn('Error importing pydantic classes, passing because we might be in the process of patching them, but it is likely they are broken and you will be unable to use them!')
|
||||||
|
|
@ -174,8 +174,8 @@ class DtypeMixin(ConfiguredBaseModel):
|
||||||
class Attribute(DtypeMixin):
|
class Attribute(DtypeMixin):
|
||||||
|
|
||||||
name: str = Field(...)
|
name: str = Field(...)
|
||||||
dims: Optional[List[str]] = Field(default_factory=list)
|
dims: Optional[List[Union[Any, str]]] = Field(default_factory=list)
|
||||||
shape: Optional[List[str]] = Field(default_factory=list)
|
shape: Optional[List[Union[Any, int, str]]] = Field(default_factory=list)
|
||||||
value: Optional[Any] = Field(None, description="""Optional constant, fixed value for the attribute.""")
|
value: Optional[Any] = Field(None, description="""Optional constant, fixed value for the attribute.""")
|
||||||
default_value: Optional[Any] = Field(None, description="""Optional default value for variable-valued attributes.""")
|
default_value: Optional[Any] = Field(None, description="""Optional default value for variable-valued attributes.""")
|
||||||
doc: str = Field(..., description="""Description of corresponding object.""")
|
doc: str = Field(..., description="""Description of corresponding object.""")
|
||||||
|
|
@ -211,8 +211,8 @@ class Dataset(NamingMixin, DtypeMixin):
|
||||||
neurodata_type_inc: Optional[str] = Field(None)
|
neurodata_type_inc: Optional[str] = Field(None)
|
||||||
name: Optional[str] = Field(None)
|
name: Optional[str] = Field(None)
|
||||||
default_name: Optional[str] = Field(None)
|
default_name: Optional[str] = Field(None)
|
||||||
dims: Optional[List[str]] = Field(default_factory=list)
|
dims: Optional[List[Union[Any, str]]] = Field(default_factory=list)
|
||||||
shape: Optional[List[str]] = Field(default_factory=list)
|
shape: Optional[List[Union[Any, int, str]]] = Field(default_factory=list)
|
||||||
value: Optional[Any] = Field(None, description="""Optional constant, fixed value for the attribute.""")
|
value: Optional[Any] = Field(None, description="""Optional constant, fixed value for the attribute.""")
|
||||||
default_value: Optional[Any] = Field(None, description="""Optional default value for variable-valued attributes.""")
|
default_value: Optional[Any] = Field(None, description="""Optional default value for variable-valued attributes.""")
|
||||||
doc: str = Field(..., description="""Description of corresponding object.""")
|
doc: str = Field(..., description="""Description of corresponding object.""")
|
||||||
|
|
|
||||||
68
nwb-schema-language/src/nwb_schema_language/patches.py
Normal file
68
nwb-schema-language/src/nwb_schema_language/patches.py
Normal file
|
|
@ -0,0 +1,68 @@
|
||||||
|
"""
|
||||||
|
Patching the source code at different stages of the code generation process
|
||||||
|
"""
|
||||||
|
|
||||||
|
from dataclasses import dataclass
|
||||||
|
from enum import StrEnum
|
||||||
|
from pathlib import Path
|
||||||
|
from typing import ClassVar, List
|
||||||
|
import re
|
||||||
|
import argparse
|
||||||
|
import pprint
|
||||||
|
|
||||||
|
class Phases(StrEnum):
|
||||||
|
post_generation = "post_generation"
|
||||||
|
|
||||||
|
@dataclass
|
||||||
|
class Patch:
|
||||||
|
phase: Phases
|
||||||
|
path: Path
|
||||||
|
"""Path relative to repository root"""
|
||||||
|
match: str
|
||||||
|
"""Regex to match the thing to be replaced"""
|
||||||
|
replacement: str
|
||||||
|
"""Regex to replace with (eg. can use capturing groups in match)"""
|
||||||
|
|
||||||
|
instances: ClassVar[List['Patch']] = []
|
||||||
|
"""
|
||||||
|
List of patches!
|
||||||
|
"""
|
||||||
|
|
||||||
|
def __post_init__(self):
|
||||||
|
self.instances.append(self)
|
||||||
|
|
||||||
|
|
||||||
|
### Patches
|
||||||
|
|
||||||
|
patch_schema_slot = Patch(
|
||||||
|
phase=Phases.post_generation,
|
||||||
|
path=Path('src/nwb_schema_language/datamodel/nwb_schema_pydantic.py'),
|
||||||
|
match=r"\n\s*(schema)(.*Field\()(.*)",
|
||||||
|
replacement=r'\n schema_\2alias="schema", \3',
|
||||||
|
)
|
||||||
|
|
||||||
|
def run_patches(phase:Phases, verbose:bool=False):
|
||||||
|
patches = [p for p in Patch.instances if p.phase == phase]
|
||||||
|
for patch in patches:
|
||||||
|
print('Patching:')
|
||||||
|
pprint.pprint(patch)
|
||||||
|
with open(patch.path, 'r') as pfile:
|
||||||
|
string = pfile.read()
|
||||||
|
string = re.sub(patch.match, patch.replacement, string)
|
||||||
|
with open(patch.path, 'w') as pfile:
|
||||||
|
pfile.write(string)
|
||||||
|
|
||||||
|
|
||||||
|
def main():
|
||||||
|
parser = argparse.ArgumentParser(
|
||||||
|
description="Run patches for a given phase of code generation"
|
||||||
|
)
|
||||||
|
parser.add_argument("--phase",
|
||||||
|
choices=list(Phases.__members__.keys()),
|
||||||
|
type=Phases)
|
||||||
|
args = parser.parse_args()
|
||||||
|
run_patches(args.phase, verbose=True)
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
@ -216,6 +216,7 @@ slots:
|
||||||
range: Schema
|
range: Schema
|
||||||
description: List of the schema to be included in this namespace.
|
description: List of the schema to be included in this namespace.
|
||||||
inlined_as_list: true
|
inlined_as_list: true
|
||||||
|
alias: schema_
|
||||||
|
|
||||||
# schema
|
# schema
|
||||||
source:
|
source:
|
||||||
|
|
@ -285,17 +286,21 @@ slots:
|
||||||
multivalued: true
|
multivalued: true
|
||||||
dims:
|
dims:
|
||||||
multivalued: true
|
multivalued: true
|
||||||
range: string
|
any_of:
|
||||||
|
- range: string
|
||||||
|
- range: AnyType
|
||||||
todos:
|
todos:
|
||||||
- Can't quite figure out how to allow an array of arrays
|
- Can't quite figure out how to allow an array of arrays - see https://github.com/linkml/linkml/issues/895
|
||||||
shape:
|
shape:
|
||||||
multivalued: true
|
multivalued: true
|
||||||
exactly_one_of:
|
any_of:
|
||||||
- range: integer
|
- range: integer
|
||||||
minimum_value: 1
|
minimum_value: 1
|
||||||
- equals_string: "null"
|
- equals_string: "null"
|
||||||
|
range: string
|
||||||
|
- range: AnyType
|
||||||
todos:
|
todos:
|
||||||
- Can't quite figure out how to allow an array of arrays
|
- Can't quite figure out how to allow an array of arrays - see https://github.com/linkml/linkml/issues/895
|
||||||
value:
|
value:
|
||||||
range: AnyType
|
range: AnyType
|
||||||
description: Optional constant, fixed value for the attribute.
|
description: Optional constant, fixed value for the attribute.
|
||||||
|
|
|
||||||
|
|
@ -9,7 +9,7 @@ from linkml_runtime.loaders import yaml_loader
|
||||||
import yaml
|
import yaml
|
||||||
|
|
||||||
from nwb_schema_language import Namespaces, Group, Dataset
|
from nwb_schema_language import Namespaces, Group, Dataset
|
||||||
from nwb_linkml.namespaces import GitRepo, NamespaceRepo
|
from nwb_linkml.namespaces import GitRepo, NamespaceRepo, NWB_CORE_REPO
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
@ -41,6 +41,13 @@ def load_schema_file(path:Path) -> List[Dataset | Group]:
|
||||||
#schema.extend([Group(**group) for group in source.get('groups', [])])
|
#schema.extend([Group(**group) for group in source.get('groups', [])])
|
||||||
return schema
|
return schema
|
||||||
|
|
||||||
|
def load_nwb_core():
|
||||||
|
namespace_file = NWB_CORE_REPO.provide_from_git()
|
||||||
|
ns = load_namespaces(namespace_file)
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
|
||||||
Loading…
Reference in a new issue