name: Tests

on:
  push:

jobs:
  test:
    strategy:
      matrix:
        python-version: [3.11]

    runs-on: ubuntu-latest

    steps:
      - uses: actions/checkout@v2

      - name: Install system libraries
        run: |
          sudo apt update
          sudo apt install -y libhdf5-dev hdf5-tools

      - name: Set up python
        uses: actions/setup-python@v4
        with:
          python-version: ${{ matrix.python-version }}
          cache: 'pip'

      - name: Install dependencies
        run: pip install -e .[tests]
        working-directory: nwb_linkml

      - name: Run Tests
        run: pytest
        working-directory: nwb_linkml

      - name: Report coverage
        working-directory: nwb_linkml
        run: "coveralls --service=github"
        env:
          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}