mirror of
https://github.com/p2p-ld/nwb-linkml.git
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2545 lines
164 KiB
TOML
2545 lines
164 KiB
TOML
# This file is automatically @generated by Poetry 1.6.1 and should not be changed by hand.
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[[package]]
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name = "annotated-types"
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version = "0.6.0"
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description = "Reusable constraint types to use with typing.Annotated"
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optional = false
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python-versions = ">=3.8"
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files = [
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{file = "annotated_types-0.6.0-py3-none-any.whl", hash = "sha256:0641064de18ba7a25dee8f96403ebc39113d0cb953a01429249d5c7564666a43"},
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{file = "annotated_types-0.6.0.tar.gz", hash = "sha256:563339e807e53ffd9c267e99fc6d9ea23eb8443c08f112651963e24e22f84a5d"},
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]
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[[package]]
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name = "antlr4-python3-runtime"
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version = "4.9.3"
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description = "ANTLR 4.9.3 runtime for Python 3.7"
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optional = false
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python-versions = "*"
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files = [
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{file = "antlr4-python3-runtime-4.9.3.tar.gz", hash = "sha256:f224469b4168294902bb1efa80a8bf7855f24c99aef99cbefc1bcd3cce77881b"},
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]
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[[package]]
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name = "arrow"
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version = "1.3.0"
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description = "Better dates & times for Python"
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optional = false
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python-versions = ">=3.8"
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files = [
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{file = "arrow-1.3.0-py3-none-any.whl", hash = "sha256:c728b120ebc00eb84e01882a6f5e7927a53960aa990ce7dd2b10f39005a67f80"},
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{file = "arrow-1.3.0.tar.gz", hash = "sha256:d4540617648cb5f895730f1ad8c82a65f2dad0166f57b75f3ca54759c4d67a85"},
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]
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[package.dependencies]
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python-dateutil = ">=2.7.0"
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types-python-dateutil = ">=2.8.10"
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[package.extras]
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doc = ["doc8", "sphinx (>=7.0.0)", "sphinx-autobuild", "sphinx-autodoc-typehints", "sphinx_rtd_theme (>=1.3.0)"]
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test = ["dateparser (==1.*)", "pre-commit", "pytest", "pytest-cov", "pytest-mock", "pytz (==2021.1)", "simplejson (==3.*)"]
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[[package]]
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name = "attrs"
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version = "23.1.0"
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description = "Classes Without Boilerplate"
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optional = false
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python-versions = ">=3.7"
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files = [
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{file = "attrs-23.1.0-py3-none-any.whl", hash = "sha256:1f28b4522cdc2fb4256ac1a020c78acf9cba2c6b461ccd2c126f3aa8e8335d04"},
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{file = "attrs-23.1.0.tar.gz", hash = "sha256:6279836d581513a26f1bf235f9acd333bc9115683f14f7e8fae46c98fc50e015"},
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]
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[package.extras]
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cov = ["attrs[tests]", "coverage[toml] (>=5.3)"]
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dev = ["attrs[docs,tests]", "pre-commit"]
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docs = ["furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-towncrier", "towncrier", "zope-interface"]
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tests = ["attrs[tests-no-zope]", "zope-interface"]
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tests-no-zope = ["cloudpickle", "hypothesis", "mypy (>=1.1.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
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[[package]]
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name = "beautifulsoup4"
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version = "4.12.2"
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description = "Screen-scraping library"
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optional = false
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python-versions = ">=3.6.0"
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files = [
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{file = "beautifulsoup4-4.12.2-py3-none-any.whl", hash = "sha256:bd2520ca0d9d7d12694a53d44ac482d181b4ec1888909b035a3dbf40d0f57d4a"},
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{file = "beautifulsoup4-4.12.2.tar.gz", hash = "sha256:492bbc69dca35d12daac71c4db1bfff0c876c00ef4a2ffacce226d4638eb72da"},
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]
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[package.dependencies]
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soupsieve = ">1.2"
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[package.extras]
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html5lib = ["html5lib"]
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lxml = ["lxml"]
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[[package]]
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name = "bioregistry"
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version = "0.10.55"
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description = "Integrated registry of biological databases and nomenclatures"
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optional = false
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python-versions = ">=3.8"
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files = [
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{file = "bioregistry-0.10.55-py3-none-any.whl", hash = "sha256:877b872838598e4f58edaef9d3c8148559e8e76f07d1f6ff1cc17066f02f88f1"},
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{file = "bioregistry-0.10.55.tar.gz", hash = "sha256:832a65f2d54a5a009c876706ef179ab25e8ecb7c94e0712c7d1c1083f95140c3"},
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]
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[package.dependencies]
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click = "*"
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curies = ">=0.6.0"
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more-click = ">=0.1.2"
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pydantic = "*"
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pystow = ">=0.1.13"
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requests = "*"
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tqdm = "*"
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[package.extras]
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align = ["beautifulsoup4", "class-resolver", "defusedxml", "fairsharing-client (>=0.1.0)", "pyyaml", "tabulate"]
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charts = ["jinja2", "matplotlib", "matplotlib-venn", "pandas", "seaborn"]
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docs = ["autodoc-pydantic", "sphinx", "sphinx-automodapi", "sphinx-click", "sphinx-rtd-theme"]
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export = ["ndex2", "pyyaml", "rdflib", "rdflib-jsonld"]
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gha = ["more-itertools"]
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health = ["click-default-group", "jinja2", "pandas", "pyyaml", "tabulate"]
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tests = ["coverage", "httpx", "more-itertools", "pytest"]
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web = ["bootstrap-flask (<=2.0.0)", "curies[fastapi]", "fastapi", "flask (<2.2.4)", "markdown", "pyyaml", "rdflib", "rdflib-endpoint", "rdflib-jsonld", "uvicorn", "werkzeug (<2.3.0)"]
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[[package]]
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name = "cachetools"
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version = "5.3.1"
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description = "Extensible memoizing collections and decorators"
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optional = false
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python-versions = ">=3.7"
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files = [
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{file = "cachetools-5.3.1-py3-none-any.whl", hash = "sha256:95ef631eeaea14ba2e36f06437f36463aac3a096799e876ee55e5cdccb102590"},
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{file = "cachetools-5.3.1.tar.gz", hash = "sha256:dce83f2d9b4e1f732a8cd44af8e8fab2dbe46201467fc98b3ef8f269092bf62b"},
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]
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[[package]]
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name = "certifi"
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version = "2023.7.22"
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description = "Python package for providing Mozilla's CA Bundle."
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optional = false
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python-versions = ">=3.6"
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files = [
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{file = "certifi-2023.7.22-py3-none-any.whl", hash = "sha256:92d6037539857d8206b8f6ae472e8b77db8058fec5937a1ef3f54304089edbb9"},
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{file = "certifi-2023.7.22.tar.gz", hash = "sha256:539cc1d13202e33ca466e88b2807e29f4c13049d6d87031a3c110744495cb082"},
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]
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[[package]]
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name = "cfgraph"
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version = "0.2.1"
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description = "rdflib collections flattening graph"
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optional = false
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python-versions = "*"
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files = [
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{file = "CFGraph-0.2.1.tar.gz", hash = "sha256:b57fe7044a10b8ff65aa3a8a8ddc7d4cd77bf511b42e57289cd52cbc29f8fe74"},
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]
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[package.dependencies]
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rdflib = ">=0.4.2"
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[[package]]
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name = "chardet"
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version = "5.2.0"
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description = "Universal encoding detector for Python 3"
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optional = false
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python-versions = ">=3.7"
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files = [
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{file = "chardet-5.2.0-py3-none-any.whl", hash = "sha256:e1cf59446890a00105fe7b7912492ea04b6e6f06d4b742b2c788469e34c82970"},
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{file = "chardet-5.2.0.tar.gz", hash = "sha256:1b3b6ff479a8c414bc3fa2c0852995695c4a026dcd6d0633b2dd092ca39c1cf7"},
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]
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[[package]]
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name = "charset-normalizer"
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version = "3.3.0"
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description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet."
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optional = false
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python-versions = ">=3.7.0"
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files = [
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version = "5.11.3"
|
|
description = "Google Spreadsheets Python API"
|
|
optional = false
|
|
python-versions = ">=3.7"
|
|
files = [
|
|
{file = "gspread-5.11.3-py3-none-any.whl", hash = "sha256:665a77fe9be4a79b606e6beb9baf8855d63dce211055cb1df1de9c2c70deb882"},
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|
{file = "gspread-5.11.3.tar.gz", hash = "sha256:7512ade467590d5ee8d49e8981c7f1ba5813fd56e78cb4dcd7a77e0cb4ce2b86"},
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|
]
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|
|
|
[package.dependencies]
|
|
google-auth = ">=1.12.0"
|
|
google-auth-oauthlib = ">=0.4.1"
|
|
|
|
[[package]]
|
|
name = "gspread-formatting"
|
|
version = "1.1.2"
|
|
description = "Complete Google Sheets formatting support for gspread worksheets"
|
|
optional = false
|
|
python-versions = "*"
|
|
files = [
|
|
{file = "gspread-formatting-1.1.2.tar.gz", hash = "sha256:4d954d8c283880c4189f5684652b114c3889ffa4b442f339b80e2371782cb4c0"},
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|
{file = "gspread_formatting-1.1.2-py2.py3-none-any.whl", hash = "sha256:e5d14477f18ec2f08db0a00d22470d1c621d53b0633412c4873d86712c9a7bca"},
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|
]
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|
|
|
[package.dependencies]
|
|
gspread = ">=3.0.0"
|
|
|
|
[[package]]
|
|
name = "hbreader"
|
|
version = "0.9.1"
|
|
description = "Honey Badger reader - a generic file/url/string open and read tool"
|
|
optional = false
|
|
python-versions = ">=3.7"
|
|
files = [
|
|
{file = "hbreader-0.9.1-py3-none-any.whl", hash = "sha256:9a6e76c9d1afc1b977374a5dc430a1ebb0ea0488205546d4678d6e31cc5f6801"},
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{file = "hbreader-0.9.1.tar.gz", hash = "sha256:d2c132f8ba6276d794c66224c3297cec25c8079d0a4cf019c061611e0a3b94fa"},
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|
]
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|
|
|
[[package]]
|
|
name = "httplib2"
|
|
version = "0.22.0"
|
|
description = "A comprehensive HTTP client library."
|
|
optional = false
|
|
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
|
|
files = [
|
|
{file = "httplib2-0.22.0-py3-none-any.whl", hash = "sha256:14ae0a53c1ba8f3d37e9e27cf37eabb0fb9980f435ba405d546948b009dd64dc"},
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|
{file = "httplib2-0.22.0.tar.gz", hash = "sha256:d7a10bc5ef5ab08322488bde8c726eeee5c8618723fdb399597ec58f3d82df81"},
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|
]
|
|
|
|
[package.dependencies]
|
|
pyparsing = {version = ">=2.4.2,<3.0.0 || >3.0.0,<3.0.1 || >3.0.1,<3.0.2 || >3.0.2,<3.0.3 || >3.0.3,<4", markers = "python_version > \"3.0\""}
|
|
|
|
[[package]]
|
|
name = "idna"
|
|
version = "3.4"
|
|
description = "Internationalized Domain Names in Applications (IDNA)"
|
|
optional = false
|
|
python-versions = ">=3.5"
|
|
files = [
|
|
{file = "idna-3.4-py3-none-any.whl", hash = "sha256:90b77e79eaa3eba6de819a0c442c0b4ceefc341a7a2ab77d7562bf49f425c5c2"},
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|
{file = "idna-3.4.tar.gz", hash = "sha256:814f528e8dead7d329833b91c5faa87d60bf71824cd12a7530b5526063d02cb4"},
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|
]
|
|
|
|
[[package]]
|
|
name = "importlib-metadata"
|
|
version = "6.8.0"
|
|
description = "Read metadata from Python packages"
|
|
optional = false
|
|
python-versions = ">=3.8"
|
|
files = [
|
|
{file = "importlib_metadata-6.8.0-py3-none-any.whl", hash = "sha256:3ebb78df84a805d7698245025b975d9d67053cd94c79245ba4b3eb694abe68bb"},
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|
{file = "importlib_metadata-6.8.0.tar.gz", hash = "sha256:dbace7892d8c0c4ac1ad096662232f831d4e64f4c4545bd53016a3e9d4654743"},
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|
]
|
|
|
|
[package.dependencies]
|
|
zipp = ">=0.5"
|
|
|
|
[package.extras]
|
|
docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
|
|
perf = ["ipython"]
|
|
testing = ["flufl.flake8", "importlib-resources (>=1.3)", "packaging", "pyfakefs", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-mypy (>=0.9.1)", "pytest-perf (>=0.9.2)", "pytest-ruff"]
|
|
|
|
[[package]]
|
|
name = "iniconfig"
|
|
version = "2.0.0"
|
|
description = "brain-dead simple config-ini parsing"
|
|
optional = false
|
|
python-versions = ">=3.7"
|
|
files = [
|
|
{file = "iniconfig-2.0.0-py3-none-any.whl", hash = "sha256:b6a85871a79d2e3b22d2d1b94ac2824226a63c6b741c88f7ae975f18b6778374"},
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{file = "iniconfig-2.0.0.tar.gz", hash = "sha256:2d91e135bf72d31a410b17c16da610a82cb55f6b0477d1a902134b24a455b8b3"},
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|
]
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|
|
|
[[package]]
|
|
name = "isodate"
|
|
version = "0.6.1"
|
|
description = "An ISO 8601 date/time/duration parser and formatter"
|
|
optional = false
|
|
python-versions = "*"
|
|
files = [
|
|
{file = "isodate-0.6.1-py2.py3-none-any.whl", hash = "sha256:0751eece944162659049d35f4f549ed815792b38793f07cf73381c1c87cbed96"},
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{file = "isodate-0.6.1.tar.gz", hash = "sha256:48c5881de7e8b0a0d648cb024c8062dc84e7b840ed81e864c7614fd3c127bde9"},
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|
]
|
|
|
|
[package.dependencies]
|
|
six = "*"
|
|
|
|
[[package]]
|
|
name = "isoduration"
|
|
version = "20.11.0"
|
|
description = "Operations with ISO 8601 durations"
|
|
optional = false
|
|
python-versions = ">=3.7"
|
|
files = [
|
|
{file = "isoduration-20.11.0-py3-none-any.whl", hash = "sha256:b2904c2a4228c3d44f409c8ae8e2370eb21a26f7ac2ec5446df141dde3452042"},
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|
{file = "isoduration-20.11.0.tar.gz", hash = "sha256:ac2f9015137935279eac671f94f89eb00584f940f5dc49462a0c4ee692ba1bd9"},
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|
]
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|
|
|
[package.dependencies]
|
|
arrow = ">=0.15.0"
|
|
|
|
[[package]]
|
|
name = "jinja2"
|
|
version = "3.1.2"
|
|
description = "A very fast and expressive template engine."
|
|
optional = false
|
|
python-versions = ">=3.7"
|
|
files = [
|
|
{file = "Jinja2-3.1.2-py3-none-any.whl", hash = "sha256:6088930bfe239f0e6710546ab9c19c9ef35e29792895fed6e6e31a023a182a61"},
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{file = "Jinja2-3.1.2.tar.gz", hash = "sha256:31351a702a408a9e7595a8fc6150fc3f43bb6bf7e319770cbc0db9df9437e852"},
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|
]
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|
|
|
[package.dependencies]
|
|
MarkupSafe = ">=2.0"
|
|
|
|
[package.extras]
|
|
i18n = ["Babel (>=2.7)"]
|
|
|
|
[[package]]
|
|
name = "jsbeautifier"
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|
version = "1.14.9"
|
|
description = "JavaScript unobfuscator and beautifier."
|
|
optional = false
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|
python-versions = "*"
|
|
files = [
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|
{file = "jsbeautifier-1.14.9.tar.gz", hash = "sha256:c738ebc36b47bd94e4ca6dd17a9004c3cc74edad582ca1d60e0e5d5945a63cb9"},
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|
]
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|
[package.dependencies]
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|
editorconfig = ">=0.12.2"
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|
six = ">=1.13.0"
|
|
|
|
[[package]]
|
|
name = "json-flattener"
|
|
version = "0.1.9"
|
|
description = "Python library for denormalizing nested dicts or json objects to tables and back"
|
|
optional = false
|
|
python-versions = ">=3.7.0"
|
|
files = [
|
|
{file = "json_flattener-0.1.9-py3-none-any.whl", hash = "sha256:6b027746f08bf37a75270f30c6690c7149d5f704d8af1740c346a3a1236bc941"},
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{file = "json_flattener-0.1.9.tar.gz", hash = "sha256:84cf8523045ffb124301a602602201665fcb003a171ece87e6f46ed02f7f0c15"},
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|
]
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|
|
|
[package.dependencies]
|
|
click = "*"
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|
pyyaml = "*"
|
|
|
|
[[package]]
|
|
name = "jsonasobj"
|
|
version = "1.3.1"
|
|
description = "JSON as python objects"
|
|
optional = false
|
|
python-versions = "*"
|
|
files = [
|
|
{file = "jsonasobj-1.3.1-py3-none-any.whl", hash = "sha256:b9e329dc1ceaae7cf5d5b214684a0b100e0dad0be6d5bbabac281ec35ddeca65"},
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{file = "jsonasobj-1.3.1.tar.gz", hash = "sha256:d52e0544a54a08f6ea3f77fa3387271e3648655e0eace2f21e825c26370e44a2"},
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|
]
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|
|
|
[[package]]
|
|
name = "jsonasobj2"
|
|
version = "1.0.4"
|
|
description = "JSON as python objects - version 2"
|
|
optional = false
|
|
python-versions = ">=3.6"
|
|
files = [
|
|
{file = "jsonasobj2-1.0.4-py3-none-any.whl", hash = "sha256:12e86f86324d54fcf60632db94ea74488d5314e3da554c994fe1e2c6f29acb79"},
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{file = "jsonasobj2-1.0.4.tar.gz", hash = "sha256:f50b1668ef478004aa487b2d2d094c304e5cb6b79337809f4a1f2975cc7fbb4e"},
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|
]
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|
|
|
[package.dependencies]
|
|
hbreader = "*"
|
|
|
|
[[package]]
|
|
name = "jsonpatch"
|
|
version = "1.33"
|
|
description = "Apply JSON-Patches (RFC 6902)"
|
|
optional = false
|
|
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, !=3.6.*"
|
|
files = [
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|
{file = "jsonpatch-1.33-py2.py3-none-any.whl", hash = "sha256:0ae28c0cd062bbd8b8ecc26d7d164fbbea9652a1a3693f3b956c1eae5145dade"},
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|
{file = "jsonpatch-1.33.tar.gz", hash = "sha256:9fcd4009c41e6d12348b4a0ff2563ba56a2923a7dfee731d004e212e1ee5030c"},
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|
]
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|
|
|
[package.dependencies]
|
|
jsonpointer = ">=1.9"
|
|
|
|
[[package]]
|
|
name = "jsonpath-ng"
|
|
version = "1.6.0"
|
|
description = "A final implementation of JSONPath for Python that aims to be standard compliant, including arithmetic and binary comparison operators and providing clear AST for metaprogramming."
|
|
optional = false
|
|
python-versions = "*"
|
|
files = [
|
|
{file = "jsonpath-ng-1.6.0.tar.gz", hash = "sha256:5483f8e9d74c39c9abfab554c070ae783c1c8cbadf5df60d561bc705ac68a07e"},
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{file = "jsonpath_ng-1.6.0-py3-none-any.whl", hash = "sha256:6fd04833412c4b3d9299edf369542f5e67095ca84efa17cbb7f06a34958adc9f"},
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|
]
|
|
|
|
[package.dependencies]
|
|
ply = "*"
|
|
|
|
[[package]]
|
|
name = "jsonpointer"
|
|
version = "2.4"
|
|
description = "Identify specific nodes in a JSON document (RFC 6901)"
|
|
optional = false
|
|
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, !=3.6.*"
|
|
files = [
|
|
{file = "jsonpointer-2.4-py2.py3-none-any.whl", hash = "sha256:15d51bba20eea3165644553647711d150376234112651b4f1811022aecad7d7a"},
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|
{file = "jsonpointer-2.4.tar.gz", hash = "sha256:585cee82b70211fa9e6043b7bb89db6e1aa49524340dde8ad6b63206ea689d88"},
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|
]
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|
|
|
[[package]]
|
|
name = "jsonschema"
|
|
version = "4.19.1"
|
|
description = "An implementation of JSON Schema validation for Python"
|
|
optional = false
|
|
python-versions = ">=3.8"
|
|
files = [
|
|
{file = "jsonschema-4.19.1-py3-none-any.whl", hash = "sha256:cd5f1f9ed9444e554b38ba003af06c0a8c2868131e56bfbef0550fb450c0330e"},
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{file = "jsonschema-4.19.1.tar.gz", hash = "sha256:ec84cc37cfa703ef7cd4928db24f9cb31428a5d0fa77747b8b51a847458e0bbf"},
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|
]
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|
|
|
[package.dependencies]
|
|
attrs = ">=22.2.0"
|
|
fqdn = {version = "*", optional = true, markers = "extra == \"format\""}
|
|
idna = {version = "*", optional = true, markers = "extra == \"format\""}
|
|
isoduration = {version = "*", optional = true, markers = "extra == \"format\""}
|
|
jsonpointer = {version = ">1.13", optional = true, markers = "extra == \"format\""}
|
|
jsonschema-specifications = ">=2023.03.6"
|
|
referencing = ">=0.28.4"
|
|
rfc3339-validator = {version = "*", optional = true, markers = "extra == \"format\""}
|
|
rfc3987 = {version = "*", optional = true, markers = "extra == \"format\""}
|
|
rpds-py = ">=0.7.1"
|
|
uri-template = {version = "*", optional = true, markers = "extra == \"format\""}
|
|
webcolors = {version = ">=1.11", optional = true, markers = "extra == \"format\""}
|
|
|
|
[package.extras]
|
|
format = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3987", "uri-template", "webcolors (>=1.11)"]
|
|
format-nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3986-validator (>0.1.0)", "uri-template", "webcolors (>=1.11)"]
|
|
|
|
[[package]]
|
|
name = "jsonschema-specifications"
|
|
version = "2023.7.1"
|
|
description = "The JSON Schema meta-schemas and vocabularies, exposed as a Registry"
|
|
optional = false
|
|
python-versions = ">=3.8"
|
|
files = [
|
|
{file = "jsonschema_specifications-2023.7.1-py3-none-any.whl", hash = "sha256:05adf340b659828a004220a9613be00fa3f223f2b82002e273dee62fd50524b1"},
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|
{file = "jsonschema_specifications-2023.7.1.tar.gz", hash = "sha256:c91a50404e88a1f6ba40636778e2ee08f6e24c5613fe4c53ac24578a5a7f72bb"},
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|
]
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|
|
|
[package.dependencies]
|
|
referencing = ">=0.28.0"
|
|
|
|
[[package]]
|
|
name = "linkml"
|
|
version = "1.6.1"
|
|
description = "Linked Open Data Modeling Language"
|
|
optional = false
|
|
python-versions = ">=3.8,<4.0"
|
|
files = [
|
|
{file = "linkml-1.6.1-py3-none-any.whl", hash = "sha256:7501cb9c7b2c13ca78fc7121ae8b5457fb5771138714da31cc11f971062070ee"},
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{file = "linkml-1.6.1.tar.gz", hash = "sha256:65f73cf29a77518972238e71e91e012c081cf2e43d71d8965ca414c78c11e08e"},
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|
]
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|
|
|
[package.dependencies]
|
|
antlr4-python3-runtime = ">=4.9.0,<4.10"
|
|
click = ">=7.0"
|
|
graphviz = ">=0.10.1"
|
|
hbreader = "*"
|
|
isodate = ">=0.6.0"
|
|
jinja2 = ">=3.1.0"
|
|
jsonasobj2 = ">=1.0.3,<2.0.0"
|
|
jsonschema = {version = ">=4.0.0", extras = ["format"]}
|
|
linkml-dataops = "*"
|
|
linkml-runtime = ">=1.6.0"
|
|
openpyxl = "*"
|
|
parse = "*"
|
|
prefixcommons = ">=0.1.7"
|
|
prefixmaps = ">=0.1.3"
|
|
pydantic = "*"
|
|
pyjsg = ">=0.11.6"
|
|
pyshex = ">=0.7.20"
|
|
pyshexc = ">=0.8.3"
|
|
python-dateutil = "*"
|
|
pyyaml = "*"
|
|
rdflib = ">=6.0.0"
|
|
requests = ">=2.22"
|
|
sqlalchemy = ">=1.4.31"
|
|
watchdog = ">=0.9.0"
|
|
|
|
[[package]]
|
|
name = "linkml-dataops"
|
|
version = "0.1.0"
|
|
description = "LinkML Data Operations API"
|
|
optional = false
|
|
python-versions = ">=3.7"
|
|
files = [
|
|
{file = "linkml_dataops-0.1.0-py3-none-any.whl", hash = "sha256:193cf7f659e5f07946d2c2761896910d5f7151d91282543b1363801f68307f4c"},
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|
{file = "linkml_dataops-0.1.0.tar.gz", hash = "sha256:4550eab65e78b70dc3b9c651724a94ac2b1d1edb2fbe576465f1d6951a54ed04"},
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|
]
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|
|
|
[package.dependencies]
|
|
jinja2 = "*"
|
|
jsonpatch = "*"
|
|
jsonpath-ng = "*"
|
|
linkml-runtime = ">=1.1.6"
|
|
"ruamel.yaml" = "*"
|
|
|
|
[[package]]
|
|
name = "linkml-runtime"
|
|
version = "1.6.0"
|
|
description = "Runtime environment for LinkML, the Linked open data modeling language"
|
|
optional = false
|
|
python-versions = ">=3.7.6,<4.0.0"
|
|
files = [
|
|
{file = "linkml_runtime-1.6.0-py3-none-any.whl", hash = "sha256:1b6b698f8cf23d63ff833ae0be8055b2e945e1c0ef06a1ed6db359247194a2eb"},
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|
{file = "linkml_runtime-1.6.0.tar.gz", hash = "sha256:a06df7431a9b929afe242598800d99cec83bb31cbdc1f5d2d70e6b26c67dc337"},
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|
]
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|
|
|
[package.dependencies]
|
|
click = "*"
|
|
curies = ">=0.5.4"
|
|
deprecated = "*"
|
|
hbreader = "*"
|
|
json-flattener = ">=0.1.9"
|
|
jsonasobj2 = ">=1.0.4,<2.dev0"
|
|
jsonschema = ">=3.2.0"
|
|
prefixcommons = ">=0.1.12"
|
|
prefixmaps = ">=0.1.4"
|
|
pydantic = ">=1.10.2,<3.0.0"
|
|
pyyaml = "*"
|
|
rdflib = ">=6.0.0"
|
|
requests = "*"
|
|
|
|
[[package]]
|
|
name = "markdown"
|
|
version = "3.5"
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|
description = "Python implementation of John Gruber's Markdown."
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optional = false
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python-versions = ">=3.8"
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files = [
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[package.dependencies]
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importlib-metadata = {version = ">=4.4", markers = "python_version < \"3.10\""}
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[package.extras]
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docs = ["mdx-gh-links (>=0.2)", "mkdocs (>=1.5)", "mkdocs-gen-files", "mkdocs-literate-nav", "mkdocs-nature (>=0.6)", "mkdocs-section-index", "mkdocstrings[python]"]
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testing = ["coverage", "pyyaml"]
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[[package]]
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name = "markupsafe"
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version = "2.1.3"
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description = "Safely add untrusted strings to HTML/XML markup."
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optional = false
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python-versions = ">=3.7"
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{file = "MarkupSafe-2.1.3.tar.gz", hash = "sha256:af598ed32d6ae86f1b747b82783958b1a4ab8f617b06fe68795c7f026abbdcad"},
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[[package]]
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name = "mergedeep"
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version = "1.3.4"
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|
description = "A deep merge function for 🐍."
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|
optional = false
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|
python-versions = ">=3.6"
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files = [
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{file = "mergedeep-1.3.4-py3-none-any.whl", hash = "sha256:70775750742b25c0d8f36c55aed03d24c3384d17c951b3175d898bd778ef0307"},
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{file = "mergedeep-1.3.4.tar.gz", hash = "sha256:0096d52e9dad9939c3d975a774666af186eda617e6ca84df4c94dec30004f2a8"},
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[[package]]
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name = "mkdocs"
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version = "1.5.3"
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|
description = "Project documentation with Markdown."
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|
optional = false
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python-versions = ">=3.7"
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files = [
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{file = "mkdocs-1.5.3-py3-none-any.whl", hash = "sha256:3b3a78e736b31158d64dbb2f8ba29bd46a379d0c6e324c2246c3bc3d2189cfc1"},
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{file = "mkdocs-1.5.3.tar.gz", hash = "sha256:eb7c99214dcb945313ba30426c2451b735992c73c2e10838f76d09e39ff4d0e2"},
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[package.dependencies]
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|
click = ">=7.0"
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|
colorama = {version = ">=0.4", markers = "platform_system == \"Windows\""}
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|
ghp-import = ">=1.0"
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|
importlib-metadata = {version = ">=4.3", markers = "python_version < \"3.10\""}
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|
jinja2 = ">=2.11.1"
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|
markdown = ">=3.2.1"
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markupsafe = ">=2.0.1"
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mergedeep = ">=1.3.4"
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packaging = ">=20.5"
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pathspec = ">=0.11.1"
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platformdirs = ">=2.2.0"
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pyyaml = ">=5.1"
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pyyaml-env-tag = ">=0.1"
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|
watchdog = ">=2.0"
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[package.extras]
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|
i18n = ["babel (>=2.9.0)"]
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|
min-versions = ["babel (==2.9.0)", "click (==7.0)", "colorama (==0.4)", "ghp-import (==1.0)", "importlib-metadata (==4.3)", "jinja2 (==2.11.1)", "markdown (==3.2.1)", "markupsafe (==2.0.1)", "mergedeep (==1.3.4)", "packaging (==20.5)", "pathspec (==0.11.1)", "platformdirs (==2.2.0)", "pyyaml (==5.1)", "pyyaml-env-tag (==0.1)", "typing-extensions (==3.10)", "watchdog (==2.0)"]
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[[package]]
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|
name = "mkdocs-material"
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version = "8.5.11"
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|
description = "Documentation that simply works"
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|
optional = false
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python-versions = ">=3.7"
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files = [
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[package.dependencies]
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jinja2 = ">=3.0.2"
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|
markdown = ">=3.2"
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|
mkdocs = ">=1.4.0"
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|
mkdocs-material-extensions = ">=1.1"
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|
pygments = ">=2.12"
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|
pymdown-extensions = ">=9.4"
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|
requests = ">=2.26"
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|
[[package]]
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|
name = "mkdocs-material-extensions"
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version = "1.2"
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|
description = "Extension pack for Python Markdown and MkDocs Material."
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|
optional = false
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python-versions = ">=3.7"
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files = [
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[[package]]
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name = "mkdocs-mermaid2-plugin"
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version = "0.6.0"
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description = "A MkDocs plugin for including mermaid graphs in markdown sources"
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|
optional = false
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|
python-versions = ">=3.5"
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files = [
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[package.dependencies]
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beautifulsoup4 = ">=4.6.3"
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jsbeautifier = "*"
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mkdocs = ">=1.0.4"
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mkdocs-material = "*"
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pymdown-extensions = ">=8.0"
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|
pyyaml = "*"
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|
requests = "*"
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|
setuptools = ">=18.5"
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|
[[package]]
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|
name = "more-click"
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|
version = "0.1.2"
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|
description = "More click."
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optional = false
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python-versions = ">=3.7"
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[package.dependencies]
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click = "*"
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[package.extras]
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tests = ["coverage", "pytest"]
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[[package]]
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name = "oauthlib"
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version = "3.2.2"
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description = "A generic, spec-compliant, thorough implementation of the OAuth request-signing logic"
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python-versions = ">=3.6"
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[package.extras]
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rsa = ["cryptography (>=3.0.0)"]
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signals = ["blinker (>=1.4.0)"]
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signedtoken = ["cryptography (>=3.0.0)", "pyjwt (>=2.0.0,<3)"]
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[[package]]
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name = "ontodev-cogs"
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|
version = "0.3.3"
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|
description = "COGS Operates Google Sheets"
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|
optional = false
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|
python-versions = ">=3.6, <4"
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|
files = [
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[[package]]
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[[package]]
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[[package]]
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click = "*"
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[package.extras]
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name = "pytest"
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[[package]]
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name = "zipp"
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version = "3.17.0"
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description = "Backport of pathlib-compatible object wrapper for zip files"
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optional = false
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python-versions = ">=3.8"
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files = [
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[package.extras]
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docs = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (<7.2.5)", "sphinx (>=3.5)", "sphinx-lint"]
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testing = ["big-O", "jaraco.functools", "jaraco.itertools", "more-itertools", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-ignore-flaky", "pytest-mypy (>=0.9.1)", "pytest-ruff"]
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[extras]
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docs = []
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[metadata]
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lock-version = "2.0"
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python-versions = "^3.9"
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content-hash = "64b3d27885bd38afe892c662d06a69f48e980d5464922329aad071e2893f40d9"
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