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sneakers-the-rat
d9d62618bc
change `namespace` annotation to `is_namespace` and use `namespace` for name of namespace dont change commit when commit is None - otherwise always reset to recent version when we don't intend to
47 lines
No EOL
1.6 KiB
Python
47 lines
No EOL
1.6 KiB
Python
import pdb
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import pytest
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from ..fixtures import nwb_core_fixture
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from nwb_schema_language import Dataset, Group
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from nwb_linkml.adapters import SchemaAdapter
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@pytest.mark.parametrize(
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['class_name','schema_file','namespace_name'],
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[
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('DynamicTable', 'table.yaml', 'hdmf-common'),
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('Container', 'base.yaml', 'hdmf-common'),
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('TimeSeries', 'nwb.base.yaml', 'core'),
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('ImageSeries', 'nwb.image.yaml', 'core')
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]
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)
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def test_find_type_source(nwb_core_fixture, class_name, schema_file, namespace_name):
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defining_sch = nwb_core_fixture.find_type_source(class_name)
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assert defining_sch.path.name == schema_file
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assert namespace_name == defining_sch.namespace
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def test_populate_imports(nwb_core_fixture):
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nwb_core_fixture.populate_imports()
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schema: SchemaAdapter
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assert len(nwb_core_fixture.schemas) > 0
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for schema in nwb_core_fixture.schemas:
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need_imports = [nwb_core_fixture.find_type_source(cls.neurodata_type_def).namespace for cls in schema.created_classes if cls.neurodata_type_inc is not None]
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need_imports = [i for i in need_imports if i != schema.namespace]
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for i in need_imports:
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assert i in schema.imports
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def test_build(nwb_core_fixture):
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pass
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def test_skip_imports(nwb_core_fixture):
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"""
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We can build just the namespace in question without also building the other namespaces that it imports
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"""
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res = nwb_core_fixture.build(skip_imports=True)
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# we shouldn't have any of the hdmf-common schema in with us
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namespaces = [sch.annotations['namespace'].value for sch in res.schemas]
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assert all([ns == 'core' for ns in namespaces]) |