nwb-linkml/nwb_linkml/models/hdmf_experimental_resources.py
sneakers-the-rat be21325123 Cleaner code generation, npytyping type hints for arrays
- split off generated subclasses into "include" files, not sure if that's good, but in any case we have them separable now.
- more work on cleanly un-nesting scalar and 1D-vector data into attributes and lists, respectively
- brought the pydantic generator in-repo to do a bunch of overrides
2023-08-28 22:16:58 -07:00

59 lines
2.2 KiB
Python

from __future__ import annotations
from datetime import datetime, date
from enum import Enum
from typing import List, Dict, Optional, Any, Union
from pydantic import BaseModel as BaseModel, Field
from nptyping import NDArray, Shape, Float, Float32, Double, Float64, LongLong, Int64, Int, Int32, Int16, Short, Int8, UInt, UInt32, UInt16, UInt8, UInt64, Number, String, Unicode, Unicode, Unicode, String, Bool, Datetime64
import sys
if sys.version_info >= (3, 8):
from typing import Literal
else:
from typing_extensions import Literal
from .hdmf_common_base import (
Container
)
from .hdmf_experimental_resources_include import (
HERDObjectKeys,
HERDObjects,
HERDEntities,
HERDKeys,
HERDFiles,
HERDEntityKeys
)
metamodel_version = "None"
version = "None"
class WeakRefShimBaseModel(BaseModel):
__slots__ = '__weakref__'
class ConfiguredBaseModel(WeakRefShimBaseModel,
validate_assignment = True,
validate_all = True,
underscore_attrs_are_private = True,
extra = 'forbid',
arbitrary_types_allowed = True,
use_enum_values = True):
pass
class HERD(Container):
"""
HDMF External Resources Data Structure. A set of six tables for tracking external resource references in a file or across multiple files.
"""
keys: HERDKeys = Field(<built-in method keys of dict object at 0x10ab5b600>, description="""A table for storing user terms that are used to refer to external resources.""")
files: HERDFiles = Field(..., description="""A table for storing object ids of files used in external resources.""")
entities: HERDEntities = Field(..., description="""A table for mapping user terms (i.e., keys) to resource entities.""")
objects: HERDObjects = Field(..., description="""A table for identifying which objects in a file contain references to external resources.""")
object_keys: HERDObjectKeys = Field(..., description="""A table for identifying which objects use which keys.""")
entity_keys: HERDEntityKeys = Field(..., description="""A table for identifying which keys use which entity.""")
# Update forward refs
# see https://pydantic-docs.helpmanual.io/usage/postponed_annotations/
HERD.update_forward_refs()