mirror of
https://github.com/p2p-ld/nwb-linkml.git
synced 2024-11-14 18:54:28 +00:00
sneakers-the-rat
be21325123
- split off generated subclasses into "include" files, not sure if that's good, but in any case we have them separable now. - more work on cleanly un-nesting scalar and 1D-vector data into attributes and lists, respectively - brought the pydantic generator in-repo to do a bunch of overrides
59 lines
2.2 KiB
Python
59 lines
2.2 KiB
Python
from __future__ import annotations
|
|
from datetime import datetime, date
|
|
from enum import Enum
|
|
from typing import List, Dict, Optional, Any, Union
|
|
from pydantic import BaseModel as BaseModel, Field
|
|
from nptyping import NDArray, Shape, Float, Float32, Double, Float64, LongLong, Int64, Int, Int32, Int16, Short, Int8, UInt, UInt32, UInt16, UInt8, UInt64, Number, String, Unicode, Unicode, Unicode, String, Bool, Datetime64
|
|
import sys
|
|
if sys.version_info >= (3, 8):
|
|
from typing import Literal
|
|
else:
|
|
from typing_extensions import Literal
|
|
|
|
|
|
from .hdmf_common_base import (
|
|
Container
|
|
)
|
|
|
|
from .hdmf_experimental_resources_include import (
|
|
HERDObjectKeys,
|
|
HERDObjects,
|
|
HERDEntities,
|
|
HERDKeys,
|
|
HERDFiles,
|
|
HERDEntityKeys
|
|
)
|
|
|
|
|
|
metamodel_version = "None"
|
|
version = "None"
|
|
|
|
class WeakRefShimBaseModel(BaseModel):
|
|
__slots__ = '__weakref__'
|
|
|
|
class ConfiguredBaseModel(WeakRefShimBaseModel,
|
|
validate_assignment = True,
|
|
validate_all = True,
|
|
underscore_attrs_are_private = True,
|
|
extra = 'forbid',
|
|
arbitrary_types_allowed = True,
|
|
use_enum_values = True):
|
|
pass
|
|
|
|
|
|
class HERD(Container):
|
|
"""
|
|
HDMF External Resources Data Structure. A set of six tables for tracking external resource references in a file or across multiple files.
|
|
"""
|
|
keys: HERDKeys = Field(<built-in method keys of dict object at 0x10ab5b600>, description="""A table for storing user terms that are used to refer to external resources.""")
|
|
files: HERDFiles = Field(..., description="""A table for storing object ids of files used in external resources.""")
|
|
entities: HERDEntities = Field(..., description="""A table for mapping user terms (i.e., keys) to resource entities.""")
|
|
objects: HERDObjects = Field(..., description="""A table for identifying which objects in a file contain references to external resources.""")
|
|
object_keys: HERDObjectKeys = Field(..., description="""A table for identifying which objects use which keys.""")
|
|
entity_keys: HERDEntityKeys = Field(..., description="""A table for identifying which keys use which entity.""")
|
|
|
|
|
|
|
|
# Update forward refs
|
|
# see https://pydantic-docs.helpmanual.io/usage/postponed_annotations/
|
|
HERD.update_forward_refs()
|