48 commits

Author	SHA1	Message	Date
sneakers-the-rat	6ce3d58528	working roundtrip serialization from extra after correcting serialization schema. doh.	2024-10-18 19:31:22 -07:00
sneakers-the-rat	33eb1c15d5	stuck at the recursion error in pydantic core	2024-10-18 00:30:33 -07:00
sneakers-the-rat	1701ef9d7e	get tests working again	2024-10-17 22:15:30 -07:00
sneakers-the-rat	b0a63af95a	tests for testing helpers	2024-10-11 00:48:02 -07:00
sneakers-the-rat	5268884050	use the validated array instance in testing numpy dump to array, not the array we would generate	2024-10-11 00:19:59 -07:00
sneakers-the-rat	84cecfb09f	ut oh left a pdb in	2024-10-11 00:10:45 -07:00
sneakers-the-rat	d9f785efdd	windows can't do <U as a path even hypothetically	2024-10-11 00:09:27 -07:00
sneakers-the-rat	1187b37b2d	hoo boy. working combinatoric testing. ... Split out annotation dtype and shape, swap out all interface tests, fix numpy and dask model casting, make merging models more efficient, correctly parameterize and mark tests!	2024-10-10 23:56:45 -07:00
sneakers-the-rat	5d4f03a8a9	finish replacing interface tests with new helper system	2024-10-10 18:58:05 -07:00
sneakers-the-rat	3356738e42	refactoring array generation, swapping in the interface case generators	2024-10-04 00:46:49 -07:00
sneakers-the-rat	7dbb22f828	format and also add pdm scripts	2024-10-03 20:01:56 -07:00
sneakers-the-rat	8f1eb6e5b4	linting for tests	2024-10-03 19:57:54 -07:00
sneakers-the-rat	f291afbbe2	create testing module, add to docs	2024-10-03 19:33:40 -07:00
sneakers-the-rat	85cef50603	refactor validation into separate module, perf improvements from not iterating over every element of array, rename array to value universally in serialized json lol	2024-09-23 23:25:20 -07:00
sneakers-the-rat	f9a992843e	tests for paths	2024-09-23 17:30:06 -07:00
sneakers-the-rat	708e6e81d8	roundtripping marked arrays, roundtrip or not	2024-09-23 15:54:55 -07:00
sneakers-the-rat	8cc2574399	add marks to all tests	2024-09-23 13:28:38 -07:00
sneakers-the-rat	70bf254ddd	lint, fix zarr dump test	2024-09-21 18:26:25 -07:00
sneakers-the-rat	b436d8d592	Roundtrip json serialization using dataclasses for all interfaces. Separate JSON schema generation from core_schema generation. More consistent json dumping behavior - always return just the array unless round_trip=True.	2024-09-20 23:44:59 -07:00
sneakers-the-rat	2cb09076fd	add ability to dump proxy classes to arrays, tests for doing so and json dumping	2024-09-20 18:28:38 -07:00
sneakers-the-rat	47e5cb8da1	bugfix - don't choke on empty datasets during validation	2024-09-03 17:41:34 -07:00
sneakers-the-rat	56c5b9ac79	support datetimes in hdf5 proxies	2024-09-03 16:54:31 -07:00
sneakers-the-rat	88fd42cdc3	fix test interfaces not being disabled	2024-09-03 13:10:26 -07:00
sneakers-the-rat	4152af1f91	allow revalidation of already-proxied arrays	2024-09-03 12:58:05 -07:00
sneakers-the-rat	d595e87e10	failing test for revalidation	2024-09-03 12:50:26 -07:00
sneakers-the-rat	e78c170a2b	correct decoding of byte arrays	2024-09-02 22:49:13 -07:00
sneakers-the-rat	f28c766b96	strings in compound dtypes	2024-09-02 22:40:17 -07:00
sneakers-the-rat	0e6ea07d5e	Add support for strings in hdf5	2024-09-02 22:14:47 -07:00
sneakers-the-rat	b1c8d3e422	Add len method to video and hdf5 interfaces, make dunder test module to test dunder methods across all interfaces	2024-09-02 18:13:28 -07:00
sneakers-the-rat	2a93694cfc	fix setting values	2024-09-02 17:05:32 -07:00
sneakers-the-rat	03fe97b7e0	add ability to index hdf5 compound datasets	2024-09-02 16:45:56 -07:00
sneakers-the-rat	dd9a8e959f	allow arbitrary dtypes, and allow pydantic models as the inner type in json schema array creation	2024-08-12 20:50:33 -07:00
sneakers-the-rat	025832aa3d	testing for fast matching mode. recursively get interface classes including disabled classes	2024-05-24 18:31:04 -07:00
sneakers-the-rat	6ebed2b804	lint	2024-05-20 21:21:45 -07:00
sneakers-the-rat	a948a41663	coverage for video tests	2024-05-20 21:20:56 -07:00
sneakers-the-rat	a4d82f0879	docs! add recursive any shaped arrays!	2024-05-20 21:16:16 -07:00
sneakers-the-rat	e2231cc9f0	video interface!	2024-05-20 19:17:46 -07:00
sneakers-the-rat	fd252e3911	fix string checking in raised asserts	2024-05-17 18:14:00 -07:00
sneakers-the-rat	3a6984f3f0	correct error raising tests after more generous numpy coercion method	2024-05-17 17:55:05 -07:00
sneakers-the-rat	5e90c1bee1	add serialization info to to_json methods, zarr dump array context option, remove coerce_list and just let numpy interface handle it	2024-05-17 17:39:30 -07:00
sneakers-the-rat	f3fd0a0ed2	coverage tests for hdf5 interface. filter numpy deprecation warnings from nptyping	2024-05-17 16:51:41 -07:00
sneakers-the-rat	2b56da6808	correct attr naming	2024-05-14 20:19:24 -07:00
sneakers-the-rat	9b13226164	tests and no covers continue	2024-05-14 20:18:04 -07:00
sneakers-the-rat	a079fbcafc	working zarr impl	2024-05-08 22:06:41 -07:00
sneakers-the-rat	b82a49df1b	Better test cases, dtype module, compound types	2024-05-08 21:29:13 -07:00
sneakers-the-rat	d884055067	not quite working zarr implementation	2024-04-29 19:49:38 -07:00
sneakers-the-rat	5b722bb6da	remove nwb_linkml remnants, add to_json method for json serialization	2024-04-22 19:31:56 -07:00
sneakers-the-rat	46060c1154	dask and hdf5 array interfaces	2024-04-08 18:36:47 -07:00