Commit graph

36 commits

Author SHA1 Message Date
f291afbbe2
create testing module, add to docs 2024-10-03 19:33:40 -07:00
85cef50603
refactor validation into separate module, perf improvements from not iterating over every element of array, rename array to value universally in serialized json lol 2024-09-23 23:25:20 -07:00
f9a992843e
tests for paths 2024-09-23 17:30:06 -07:00
708e6e81d8
roundtripping marked arrays, roundtrip or not 2024-09-23 15:54:55 -07:00
8cc2574399
add marks to all tests 2024-09-23 13:28:38 -07:00
70bf254ddd
lint, fix zarr dump test 2024-09-21 18:26:25 -07:00
b436d8d592
Roundtrip json serialization using dataclasses for all interfaces. Separate JSON schema generation from core_schema generation. More consistent json dumping behavior - always return just the array unless round_trip=True. 2024-09-20 23:44:59 -07:00
2cb09076fd
add ability to dump proxy classes to arrays, tests for doing so and json dumping 2024-09-20 18:28:38 -07:00
47e5cb8da1
bugfix - don't choke on empty datasets during validation 2024-09-03 17:41:34 -07:00
56c5b9ac79
support datetimes in hdf5 proxies 2024-09-03 16:54:31 -07:00
88fd42cdc3
fix test interfaces not being disabled 2024-09-03 13:10:26 -07:00
4152af1f91
allow revalidation of already-proxied arrays 2024-09-03 12:58:05 -07:00
d595e87e10
failing test for revalidation 2024-09-03 12:50:26 -07:00
e78c170a2b
correct decoding of byte arrays 2024-09-02 22:49:13 -07:00
f28c766b96
strings in compound dtypes 2024-09-02 22:40:17 -07:00
0e6ea07d5e
Add support for strings in hdf5 2024-09-02 22:14:47 -07:00
b1c8d3e422
Add len method to video and hdf5 interfaces, make dunder test module to test dunder methods across all interfaces 2024-09-02 18:13:28 -07:00
2a93694cfc
fix setting values 2024-09-02 17:05:32 -07:00
03fe97b7e0
add ability to index hdf5 compound datasets 2024-09-02 16:45:56 -07:00
dd9a8e959f
allow arbitrary dtypes, and allow pydantic models as the inner type in json schema array creation 2024-08-12 20:50:33 -07:00
025832aa3d
testing for fast matching mode. recursively get interface classes including disabled classes 2024-05-24 18:31:04 -07:00
6ebed2b804
lint 2024-05-20 21:21:45 -07:00
a948a41663
coverage for video tests 2024-05-20 21:20:56 -07:00
a4d82f0879
docs! add recursive any shaped arrays! 2024-05-20 21:16:16 -07:00
e2231cc9f0
video interface! 2024-05-20 19:17:46 -07:00
fd252e3911
fix string checking in raised asserts 2024-05-17 18:14:00 -07:00
3a6984f3f0
correct error raising tests after more generous numpy coercion method 2024-05-17 17:55:05 -07:00
5e90c1bee1
add serialization info to to_json methods, zarr dump array context option, remove coerce_list and just let numpy interface handle it 2024-05-17 17:39:30 -07:00
f3fd0a0ed2
coverage tests for hdf5 interface. filter numpy deprecation warnings from nptyping 2024-05-17 16:51:41 -07:00
2b56da6808
correct attr naming 2024-05-14 20:19:24 -07:00
9b13226164
tests and no covers continue 2024-05-14 20:18:04 -07:00
a079fbcafc
working zarr impl 2024-05-08 22:06:41 -07:00
b82a49df1b
Better test cases, dtype module, compound types 2024-05-08 21:29:13 -07:00
d884055067
not quite working zarr implementation 2024-04-29 19:49:38 -07:00
5b722bb6da
remove nwb_linkml remnants, add to_json method for json serialization 2024-04-22 19:31:56 -07:00
46060c1154
dask and hdf5 array interfaces 2024-04-08 18:36:47 -07:00