119 commits

Author	SHA1	Message	Date
sneakers-the-rat	49585e467a	working on grpah loading of nwb files	2024-08-31 01:47:42 -07:00
sneakers-the-rat	b555ccb199	testing nwb file, and experimenting with yaml format	2024-08-30 00:39:10 -07:00
sneakers-the-rat	a7a935d508	initial refactor	2024-08-15 23:31:40 -07:00
sneakers-the-rat	ec7a8254fe	fix tsrv test	2024-08-15 01:55:15 -07:00
sneakers-the-rat	24494b8ee4	reference vector series tests, fix model tests	2024-08-15 01:43:42 -07:00
sneakers-the-rat	ce096db349	aligned dynamictable tests	2024-08-15 00:57:44 -07:00
sneakers-the-rat	7e7cbc1ac1	fix setattr for index and data	2024-08-14 23:03:03 -07:00
sneakers-the-rat	54409c7b28	codespell istg	2024-08-14 22:27:01 -07:00
sneakers-the-rat	36add1a306	region tests	2024-08-14 22:17:03 -07:00
sneakers-the-rat	7cb8eea6fe	lint	2024-08-14 00:21:48 -07:00
sneakers-the-rat	b610f32c4b	vectordata indexing tests	2024-08-14 00:21:06 -07:00
sneakers-the-rat	5780947fe6	indexing tests, fix for pytest 8, logging tests	2024-08-14 00:09:24 -07:00
sneakers-the-rat	43ff3503dc	more texts. Fix coercion with ndarrays and vectordata, incl numpydantic 1.3.3 making ndarray types callable	2024-08-13 23:38:53 -07:00
sneakers-the-rat	01e46f7531	Make VectorData and VectorIndex generics to ensure coercion to VectorData for declared columns	2024-08-13 21:25:56 -07:00
sneakers-the-rat	0a93195726	lint	2024-08-12 22:59:15 -07:00
sneakers-the-rat	06a18c23a8	working aligned dynamic table and TimeSeriesReferenceVectorData	2024-08-12 22:57:00 -07:00
sneakers-the-rat	0452a4359f	add logging. less janky adapter instantiation using model validators. correctly propagate properties from ancestor classes when building	2024-08-12 18:48:59 -07:00
sneakers-the-rat	92d28baedd	coercion for extra columns passed as arrays	2024-08-07 20:23:18 -07:00
sneakers-the-rat	cebb21993d	actually fix indexing	2024-08-07 19:22:29 -07:00
sneakers-the-rat	362965daf5	correct test for equality for series	2024-08-07 18:56:01 -07:00
sneakers-the-rat	9e7c53344d	oop	2024-08-07 02:28:06 -07:00
sneakers-the-rat	a9909485a4	my god it works but what have i done	2024-08-07 02:03:04 -07:00
sneakers-the-rat	a993ee10f2	continue removing nptyping, actually fix indexing	2024-08-06 21:40:23 -07:00
sneakers-the-rat	3ee7c68e15	fix array casting for dtypes that have a shape attr but nothing in it	2024-08-06 20:41:00 -07:00
sneakers-the-rat	edea802ff1	remove dask, nptyping	2024-08-06 20:35:23 -07:00
sneakers-the-rat	a11d3d042e	working ragged array indexing before rebuilding models	2024-08-06 19:44:04 -07:00
sneakers-the-rat	c2e663eca0	fuckin LINT	2024-08-05 21:12:34 -07:00
sneakers-the-rat	6431afa7e5	update tests	2024-08-05 21:11:12 -07:00
sneakers-the-rat	c06859a537	first impl of dynamictable working!	2024-08-05 20:51:52 -07:00
sneakers-the-rat	b3b5b9d793	unify naming of derived child groups, arrays, and values as just all being named "value". Add link building. Fix erroneously collapsing anonymous and named container groups.	2024-08-05 16:05:44 -07:00
sneakers-the-rat	38e8a6f7a0	lint	2024-07-31 01:27:45 -07:00
sneakers-the-rat	abf1b0e6c0	update hdmf models/schema	2024-07-31 01:17:39 -07:00
sneakers-the-rat	d118477d8a	add dynamictable, vectordata, vectorindex mixins	2024-07-31 01:13:31 -07:00
sneakers-the-rat	c39d464e89	fix tests - update docstring tests, fix numpydantic import injects	2024-07-29 18:20:30 -07:00
sneakers-the-rat	73ae5be91c	lint	2024-07-29 16:28:48 -07:00
sneakers-the-rat	04b08f10fc	wtf and a third commit, i gotta figure out what thats about	2024-07-29 16:22:29 -07:00
sneakers-the-rat	c98f25f973	Named generic for dynamictableregions, etc.	2024-07-26 19:54:35 -07:00
sneakers-the-rat	3d8403e9e3	lint	2024-07-24 22:49:35 -07:00
sneakers-the-rat	781b667952	working pydantic provider (at least superficially)	2024-07-24 21:51:55 -07:00
sneakers-the-rat	974058ce5f	assorted cleanings but i am tired	2024-07-19 21:28:24 -07:00
sneakers-the-rat	2e7670a2bd	yaml peek to quickly find the value of a key	2024-07-19 20:50:18 -07:00
sneakers-the-rat	27d18b69d8	continue stripping out old linkml monkeypatching	2024-07-18 01:01:29 -07:00
sneakers-the-rat	1920c9f292	continue removing NDArray type, since it's in numpydantic now.	2024-07-10 00:20:01 -07:00
sneakers-the-rat	2f59f0a69b	refactor providers into modules	2024-07-09 23:52:58 -07:00
sneakers-the-rat	b6af8c9718	lint	2024-07-09 03:32:37 -07:00
sneakers-the-rat	f4d397cde1	more docs for dataset adapters. ... also: - fix search for initial - in dataset doctest - don't clear git repos on repeated test runs - fix string handling in load_yaml	2024-07-09 03:26:45 -07:00
sneakers-the-rat	ce902476d1	working version of pretty doctests with sybil :)	2024-07-09 00:27:22 -07:00
sneakers-the-rat	b9ed7c0026	testing custom directive for doctests	2024-07-08 19:07:21 -07:00
sneakers-the-rat	ec81032ae8	handle compound dtype	2024-07-03 20:39:49 -07:00
sneakers-the-rat	19d97ad3af	regenerate models, lint	2024-07-03 01:51:48 -07:00