227 commits

Author	SHA1	Message	Date
sneakers-the-rat	01e46f7531	Make VectorData and VectorIndex generics to ensure coercion to VectorData for declared columns	2024-08-13 21:25:56 -07:00
sneakers-the-rat	50005d33e5	fuckin codespell. ... also don't double run tests	2024-08-13 19:11:46 -07:00
sneakers-the-rat	1715043c01	lint	2024-08-13 19:09:43 -07:00
sneakers-the-rat	9bd36340d7	eager resolution of hdmf namespace when loaded from yaml	2024-08-13 19:08:36 -07:00
sneakers-the-rat	0a93195726	lint	2024-08-12 22:59:15 -07:00
sneakers-the-rat	6c07b87ba0	regenerate models	2024-08-12 22:57:32 -07:00
sneakers-the-rat	06a18c23a8	working aligned dynamic table and TimeSeriesReferenceVectorData	2024-08-12 22:57:00 -07:00
sneakers-the-rat	dd99ac24eb	regenerate models	2024-08-12 19:25:48 -07:00
sneakers-the-rat	994b79e0f2	actually no that's stupid, linkml handles inheritance except for the one special case of compound dtypes which aren't a thing in linkml and are here used exclusively for 1d vectors.	2024-08-12 19:25:12 -07:00
sneakers-the-rat	0452a4359f	add logging. less janky adapter instantiation using model validators. correctly propagate properties from ancestor classes when building	2024-08-12 18:48:59 -07:00
sneakers-the-rat	c09b633cda	lint	2024-08-08 00:32:24 -07:00
sneakers-the-rat	54c18e333e	initial draft of aligned dynamic table before testing and refining. switch pandas import to module-level	2024-08-08 00:31:41 -07:00
sneakers-the-rat	92d28baedd	coercion for extra columns passed as arrays	2024-08-07 20:23:18 -07:00
sneakers-the-rat	cebb21993d	actually fix indexing	2024-08-07 19:22:29 -07:00
sneakers-the-rat	362965daf5	correct test for equality for series	2024-08-07 18:56:01 -07:00
sneakers-the-rat	9e7c53344d	oop	2024-08-07 02:28:06 -07:00
sneakers-the-rat	a9909485a4	my god it works but what have i done	2024-08-07 02:03:04 -07:00
sneakers-the-rat	a993ee10f2	continue removing nptyping, actually fix indexing	2024-08-06 21:40:23 -07:00
sneakers-the-rat	3ee7c68e15	fix array casting for dtypes that have a shape attr but nothing in it	2024-08-06 20:41:00 -07:00
sneakers-the-rat	edea802ff1	remove dask, nptyping	2024-08-06 20:35:23 -07:00
sneakers-the-rat	a309c25c3d	regenerate model, lint	2024-08-06 19:57:45 -07:00
sneakers-the-rat	a11d3d042e	working ragged array indexing before rebuilding models	2024-08-06 19:44:04 -07:00
sneakers-the-rat	c2e663eca0	fuckin LINT	2024-08-05 21:12:34 -07:00
sneakers-the-rat	6431afa7e5	update tests	2024-08-05 21:11:12 -07:00
sneakers-the-rat	83dd59d30d	lint!	2024-08-05 20:59:01 -07:00
sneakers-the-rat	51ceb14309	regenerate models	2024-08-05 20:56:08 -07:00
sneakers-the-rat	c06859a537	first impl of dynamictable working!	2024-08-05 20:51:52 -07:00
sneakers-the-rat	e5d1cc52de	regenerate models	2024-08-05 18:41:53 -07:00
sneakers-the-rat	da6d0d8608	correctly handle attributes	2024-08-05 18:41:38 -07:00
sneakers-the-rat	652ddb3b48	update hdmf common table	2024-08-05 17:09:58 -07:00
sneakers-the-rat	374bd8971d	fix name array -> value in hdmf mixins	2024-08-05 17:06:59 -07:00
sneakers-the-rat	0a150d6bc2	update models	2024-08-05 16:06:05 -07:00
sneakers-the-rat	b3b5b9d793	unify naming of derived child groups, arrays, and values as just all being named "value". Add link building. Fix erroneously collapsing anonymous and named container groups.	2024-08-05 16:05:44 -07:00
sneakers-the-rat	e72c860edd	update models with shorter names	2024-08-05 14:19:03 -07:00
sneakers-the-rat	9bfee3548e	make names less lengthy by only contatenating one layer of nesting with __	2024-08-05 14:09:50 -07:00
sneakers-the-rat	b2d7b12a78	update numpydantic version and relock	2024-07-31 02:07:44 -07:00
sneakers-the-rat	2fef717a62	fix attr access in linkml provider result	2024-07-31 01:58:31 -07:00
sneakers-the-rat	0d10ba9d75	regenerate models, lint	2024-07-31 01:56:48 -07:00
sneakers-the-rat	1d527d8f71	fix hdmf forwardrefs, remove numpy types temporarily	2024-07-31 01:54:14 -07:00
sneakers-the-rat	776078ae67	add pandas	2024-07-31 01:30:06 -07:00
sneakers-the-rat	38e8a6f7a0	lint	2024-07-31 01:27:45 -07:00
sneakers-the-rat	abf1b0e6c0	update hdmf models/schema	2024-07-31 01:17:39 -07:00
sneakers-the-rat	d118477d8a	add dynamictable, vectordata, vectorindex mixins	2024-07-31 01:13:31 -07:00
sneakers-the-rat	c39d464e89	fix tests - update docstring tests, fix numpydantic import injects	2024-07-29 18:20:30 -07:00
sneakers-the-rat	f08216a43f	update models	2024-07-29 18:19:34 -07:00
sneakers-the-rat	19e49cf68d	regenerate models after fixing classvar mutation in numpydantic linkml branch	2024-07-29 17:34:28 -07:00
sneakers-the-rat	2f0af1ef3c	linting continues	2024-07-29 16:30:53 -07:00
sneakers-the-rat	73ae5be91c	lint	2024-07-29 16:28:48 -07:00
sneakers-the-rat	04b08f10fc	wtf and a third commit, i gotta figure out what thats about	2024-07-29 16:22:29 -07:00
sneakers-the-rat	011902d2cb	update models round 2 for how pycharm always misses half the files for some reason...	2024-07-29 16:18:23 -07:00