333 commits

This branch

This branch

All branches

Author	SHA1	Message	Date
sneakers-the-rat	da6d0d8608	correctly handle attributes	2024-08-05 18:41:38 -07:00
sneakers-the-rat	652ddb3b48	update hdmf common table	2024-08-05 17:09:58 -07:00
sneakers-the-rat	374bd8971d	fix name array -> value in hdmf mixins	2024-08-05 17:06:59 -07:00
sneakers-the-rat	0a150d6bc2	update models	2024-08-05 16:06:05 -07:00
sneakers-the-rat	b3b5b9d793	unify naming of derived child groups, arrays, and values as just all being named "value". Add link building. Fix erroneously collapsing anonymous and named container groups.	2024-08-05 16:05:44 -07:00
sneakers-the-rat	e72c860edd	update models with shorter names	2024-08-05 14:19:03 -07:00
sneakers-the-rat	9bfee3548e	make names less lengthy by only contatenating one layer of nesting with __	2024-08-05 14:09:50 -07:00
sneakers-the-rat	b2d7b12a78	update numpydantic version and relock	2024-07-31 02:07:44 -07:00
sneakers-the-rat	66369c7686	no op to update github cache?	2024-07-31 02:00:31 -07:00
sneakers-the-rat	2fef717a62	fix attr access in linkml provider result	2024-07-31 01:58:31 -07:00
sneakers-the-rat	0d10ba9d75	regenerate models, lint	2024-07-31 01:56:48 -07:00
sneakers-the-rat	1d527d8f71	fix hdmf forwardrefs, remove numpy types temporarily	2024-07-31 01:54:14 -07:00
sneakers-the-rat	776078ae67	add pandas	2024-07-31 01:30:06 -07:00
sneakers-the-rat	38e8a6f7a0	lint	2024-07-31 01:27:45 -07:00
sneakers-the-rat	abf1b0e6c0	update hdmf models/schema	2024-07-31 01:17:39 -07:00
sneakers-the-rat	d118477d8a	add dynamictable, vectordata, vectorindex mixins	2024-07-31 01:13:31 -07:00
Jonny Saunders	723f53035d	Merge pull request #4 from p2p-ld/linkml-arrays ... Convert to linkml-arrays :)	2024-07-29 19:19:48 -07:00
sneakers-the-rat	c39d464e89	fix tests - update docstring tests, fix numpydantic import injects	2024-07-29 18:20:30 -07:00
sneakers-the-rat	f08216a43f	update models	2024-07-29 18:19:34 -07:00
sneakers-the-rat	19e49cf68d	regenerate models after fixing classvar mutation in numpydantic linkml branch	2024-07-29 17:34:28 -07:00
sneakers-the-rat	f955c2acc3	getting spanked by codespell as usual	2024-07-29 16:31:34 -07:00
sneakers-the-rat	2f0af1ef3c	linting continues	2024-07-29 16:30:53 -07:00
sneakers-the-rat	73ae5be91c	lint	2024-07-29 16:28:48 -07:00
sneakers-the-rat	04b08f10fc	wtf and a third commit, i gotta figure out what thats about	2024-07-29 16:22:29 -07:00
sneakers-the-rat	011902d2cb	update models round 2 for how pycharm always misses half the files for some reason...	2024-07-29 16:18:23 -07:00
sneakers-the-rat	76fb58e783	update models	2024-07-29 16:16:02 -07:00
sneakers-the-rat	e0dde2c52f	translation notes	2024-07-29 15:30:51 -07:00
sneakers-the-rat	baa5471af7	getting started doing hdmf mixins but am tired	2024-07-26 21:58:07 -07:00
sneakers-the-rat	c98f25f973	Named generic for dynamictableregions, etc.	2024-07-26 19:54:35 -07:00
sneakers-the-rat	3d8403e9e3	lint	2024-07-24 22:49:35 -07:00
sneakers-the-rat	af11bb61ec	fix imports being inside the any_of range, more manual inspection before finishing for the night	2024-07-24 22:47:06 -07:00
sneakers-the-rat	781b667952	working pydantic provider (at least superficially)	2024-07-24 21:51:55 -07:00
sneakers-the-rat	974058ce5f	assorted cleanings but i am tired	2024-07-19 21:28:24 -07:00
sneakers-the-rat	43187bfa3e	add numpy type to language element types	2024-07-19 20:50:48 -07:00
sneakers-the-rat	2e7670a2bd	yaml peek to quickly find the value of a key	2024-07-19 20:50:18 -07:00
sneakers-the-rat	27d18b69d8	continue stripping out old linkml monkeypatching	2024-07-18 01:01:29 -07:00
sneakers-the-rat	ec843a508b	update branch for linkml	2024-07-18 00:39:56 -07:00
sneakers-the-rat	1920c9f292	continue removing NDArray type, since it's in numpydantic now.	2024-07-10 00:20:01 -07:00
sneakers-the-rat	d6750f8df1	we don't need blosc tho	2024-07-10 00:09:17 -07:00
sneakers-the-rat	878c51e069	we do need black as a runtime dep	2024-07-10 00:05:41 -07:00
sneakers-the-rat	b83865352c	the hell was that	2024-07-10 00:02:39 -07:00
sneakers-the-rat	bf7f62fd8f	lint	2024-07-09 23:54:28 -07:00
sneakers-the-rat	2f59f0a69b	refactor providers into modules	2024-07-09 23:52:58 -07:00
sneakers-the-rat	efd05724e3	minor todos	2024-07-09 23:15:29 -07:00
sneakers-the-rat	b6af8c9718	lint	2024-07-09 03:32:37 -07:00
sneakers-the-rat	f4d397cde1	more docs for dataset adapters. ... also: - fix search for initial - in dataset doctest - don't clear git repos on repeated test runs - fix string handling in load_yaml	2024-07-09 03:26:45 -07:00
sneakers-the-rat	ce902476d1	working version of pretty doctests with sybil :)	2024-07-09 00:27:22 -07:00
sneakers-the-rat	5ccc9e6fbd	black format models	2024-07-09 00:24:08 -07:00
sneakers-the-rat	34c8be3a2c	functional docs build	2024-07-08 21:37:02 -07:00
sneakers-the-rat	fdf80666fb	regenerate models with numpydantic	2024-07-08 19:29:48 -07:00